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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G289100.1 Wheat plastid 96.88 85.41
TraesCS2B01G307500.1 Wheat plastid 96.52 85.28
TraesCS2A01G291100.1 Wheat plastid 96.52 85.1
OQU81478 Sorghum cytosol 85.37 83.67
HORVU5Hr1G081860.1 Barley cytosol 71.58 78.14
Zm00001d003847_P001 Maize plastid 85.73 76.72
GSMUA_Achr6P23780_001 Banana cytosol 67.87 66.98
GSMUA_Achr10P... Banana plastid 68.35 57.52
CDY38846 Canola plastid 63.79 57.14
CDY32646 Canola plastid 63.55 56.75
Bra029193.1-P Field mustard plastid 63.91 56.52
CDX71686 Canola plastid 62.83 56.22
AT5G51070.1 Thale cress plastid 63.55 56.08
VIT_19s0014g00020.t01 Wine grape plastid 63.43 55.92
Solyc03g117950.2.1 Tomato nucleus 62.35 53.94
PGSC0003DMT400036893 Potato plastid 62.11 53.68
KRH63903 Soybean plastid 59.95 52.85
KRH54048 Soybean plastid 59.47 52.21
HORVU5Hr1G123460.3 Barley mitochondrion 27.1 47.38
HORVU5Hr1G102460.1 Barley cytosol 8.03 43.51
HORVU7Hr1G105430.1 Barley cytosol 27.46 40.82
HORVU2Hr1G071080.3 Barley plastid 44.72 40.68
HORVU7Hr1G105530.1 Barley cytosol 32.01 40.64
HORVU5Hr1G102440.2 Barley mitochondrion, plastid 32.25 40.27
HORVU4Hr1G008860.1 Barley cytosol, peroxisome 10.55 40.18
HORVU7Hr1G008940.2 Barley cytosol 30.34 39.84
HORVU7Hr1G008950.1 Barley cytosol, plastid 11.27 39.5
HORVU7Hr1G035110.4 Barley cytosol 20.74 39.32
HORVU7Hr1G009000.2 Barley cytosol 16.55 39.2
HORVU1Hr1G068970.1 Barley cytosol 33.57 38.84
HORVU7Hr1G008380.2 Barley cytosol 13.55 38.7
HORVU4Hr1G014120.2 Barley plastid 42.93 38.17
HORVU7Hr1G105270.3 Barley cytosol 32.61 38.1
HORVU5Hr1G031470.6 Barley endoplasmic reticulum, golgi, mitochondrion, plastid 44.12 37.82
HORVU6Hr1G063810.3 Barley plastid 12.71 37.59
HORVU1Hr1G076190.4 Barley nucleus 39.21 35.7
HORVU3Hr1G071120.7 Barley cytosol 38.37 35.01
HORVU6Hr1G028690.1 Barley mitochondrion 39.81 33.74
HORVU4Hr1G090440.2 Barley plastid 40.53 31.95
HORVU1Hr1G076100.1 Barley cytosol 5.52 28.22
Protein Annotations
Gene3D:1.10.1780.10Gene3D:1.10.8.60MapMan:19.4.2.9.5Gene3D:3.40.50.300UniProt:A0A287IEL6InterPro:AAA+_ATPase
InterPro:ATPase_AAA_coreInterPro:ClpA/BInterPro:ClpA/B_CS1InterPro:ClpA/B_CS2InterPro:Clp_ATPase_CInterPro:Clp_N
InterPro:Clp_N_dom_sfncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524
GO:GO:0008150GO:GO:0008152GO:GO:0019538EnsemblPlantsGene:HORVU2Hr1G072020EnsemblPlants:HORVU2Hr1G072020.5InterPro:IPR036628
InterPro:P-loop_NTPasePFAM:PF00004PFAM:PF02861PFAM:PF07724PFAM:PF10431PRINTS:PR00300
ScanProsite:PS00870ScanProsite:PS00871PANTHER:PTHR43572PANTHER:PTHR43572:SF17SMART:SM00382SMART:SM01086
SUPFAM:SSF52540SUPFAM:SSF81923UniParc:UPI000B487FF8SEG:seg::
Description
No Description!
Coordinates
chrchr2H:-:515709444..515725317
Molecular Weight (calculated)
91463.5 Da
IEP (calculated)
8.143
GRAVY (calculated)
-0.223
Length
834 amino acids
Sequence
(BLAST)
001: SRHKQIPFLP SSSAAPQRIS IHHREACRAA VGKGGPAQAA TGLATDVPFS GASKRVFVAA VEFSRNMGCN FISPDHIALG LFDLDDPTTN SILKSLGVVP
101: AQLAKQALTR VKGELAKDGR EPLGLSSFKL RDKSTAGNGR TGIAKYSNKK KEKSALAQFC IDLTMRASGG FIDPVIGRAK EIERVVQIIC RRTKNNPILL
201: GEAGVGKTAI AEGLALKIAN GDVPIFLVGK RILSLDVALL MAGAKERGEL EARVTSLIRE VRKADDVILF IDEVHTLIGS GIAGRGNKGA GLDIANLLKP
301: ALARGELQCI ASTTLDEHRL HFEKDKALAR RFQPVFVNEP SQEDAVKILL GLREKYETYH KCKYTLEGIN AAVYLSMRYI PDRHLPDKVI DLIDEAGSRA
401: RMESFKKKKE EQCSIILKSP DEYWQEIRAV QAMHEVAQTN RLKYSLNEND QENEVNVEVL DDSKTSPRTT PSTSADEPSV VGSEEIARVT SLWSGIPVQQ
501: LTADERKLLV GLDDELRKRV IGQDDAVVAI SRAVKRSRVG MSDPDRPIAT LLFCGPTGVG KTELTKALAS TYFGSESAMV RLDMSEYMER HAVSKLIGSP
601: PGYMGFGEGG TLTEAVRRKP FTVVLFDEIE KAHPDIFNIL LQVFEDGHLT DSQGRRVSFK NTLIVMTSNV GSTSISKGTM SMGFQTQSDT EENTYAVMKS
701: LVMEELKAFF RPELLNRMDE VVVFRPLEKT QMLAILNIIM EEVKGRLLAL GIGLVVSDAM KNMISQQGYD KSYGARPLRR AVTQLVEDVI SEAILSGQYK
801: PGDTIMMDTD DKGKPCLSRL NDQTVQVSDP TPTL
Best Arabidopsis Sequence Match ( AT5G51070.1 )
(BLAST)
001: MEVLSTSSPL TLHSHRLLSA SSSSSHVTSI AASSLSSFAS SYLGISLSNR TIHRFSTTPT NLRRFPQRKR KKFTPISAVF ERFTERAIRA IIFSQKEAKS
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA
Arabidopsis Description
CLPDChaperone protein ClpD, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42762]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.