Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G289100.1 | Wheat | plastid | 96.88 | 85.41 |
TraesCS2B01G307500.1 | Wheat | plastid | 96.52 | 85.28 |
TraesCS2A01G291100.1 | Wheat | plastid | 96.52 | 85.1 |
OQU81478 | Sorghum | cytosol | 85.37 | 83.67 |
HORVU5Hr1G081860.1 | Barley | cytosol | 71.58 | 78.14 |
Zm00001d003847_P001 | Maize | plastid | 85.73 | 76.72 |
GSMUA_Achr6P23780_001 | Banana | cytosol | 67.87 | 66.98 |
GSMUA_Achr10P... | Banana | plastid | 68.35 | 57.52 |
CDY38846 | Canola | plastid | 63.79 | 57.14 |
CDY32646 | Canola | plastid | 63.55 | 56.75 |
Bra029193.1-P | Field mustard | plastid | 63.91 | 56.52 |
CDX71686 | Canola | plastid | 62.83 | 56.22 |
AT5G51070.1 | Thale cress | plastid | 63.55 | 56.08 |
VIT_19s0014g00020.t01 | Wine grape | plastid | 63.43 | 55.92 |
Solyc03g117950.2.1 | Tomato | nucleus | 62.35 | 53.94 |
PGSC0003DMT400036893 | Potato | plastid | 62.11 | 53.68 |
KRH63903 | Soybean | plastid | 59.95 | 52.85 |
KRH54048 | Soybean | plastid | 59.47 | 52.21 |
HORVU5Hr1G123460.3 | Barley | mitochondrion | 27.1 | 47.38 |
HORVU5Hr1G102460.1 | Barley | cytosol | 8.03 | 43.51 |
HORVU7Hr1G105430.1 | Barley | cytosol | 27.46 | 40.82 |
HORVU2Hr1G071080.3 | Barley | plastid | 44.72 | 40.68 |
HORVU7Hr1G105530.1 | Barley | cytosol | 32.01 | 40.64 |
HORVU5Hr1G102440.2 | Barley | mitochondrion, plastid | 32.25 | 40.27 |
HORVU4Hr1G008860.1 | Barley | cytosol, peroxisome | 10.55 | 40.18 |
HORVU7Hr1G008940.2 | Barley | cytosol | 30.34 | 39.84 |
HORVU7Hr1G008950.1 | Barley | cytosol, plastid | 11.27 | 39.5 |
HORVU7Hr1G035110.4 | Barley | cytosol | 20.74 | 39.32 |
HORVU7Hr1G009000.2 | Barley | cytosol | 16.55 | 39.2 |
HORVU1Hr1G068970.1 | Barley | cytosol | 33.57 | 38.84 |
HORVU7Hr1G008380.2 | Barley | cytosol | 13.55 | 38.7 |
HORVU4Hr1G014120.2 | Barley | plastid | 42.93 | 38.17 |
HORVU7Hr1G105270.3 | Barley | cytosol | 32.61 | 38.1 |
HORVU5Hr1G031470.6 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 44.12 | 37.82 |
HORVU6Hr1G063810.3 | Barley | plastid | 12.71 | 37.59 |
HORVU1Hr1G076190.4 | Barley | nucleus | 39.21 | 35.7 |
HORVU3Hr1G071120.7 | Barley | cytosol | 38.37 | 35.01 |
HORVU6Hr1G028690.1 | Barley | mitochondrion | 39.81 | 33.74 |
HORVU4Hr1G090440.2 | Barley | plastid | 40.53 | 31.95 |
HORVU1Hr1G076100.1 | Barley | cytosol | 5.52 | 28.22 |
Protein Annotations
Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:19.4.2.9.5 | Gene3D:3.40.50.300 | UniProt:A0A287IEL6 | InterPro:AAA+_ATPase |
InterPro:ATPase_AAA_core | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | InterPro:Clp_N |
InterPro:Clp_N_dom_sf | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0019538 | EnsemblPlantsGene:HORVU2Hr1G072020 | EnsemblPlants:HORVU2Hr1G072020.5 | InterPro:IPR036628 |
InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 |
ScanProsite:PS00870 | ScanProsite:PS00871 | PANTHER:PTHR43572 | PANTHER:PTHR43572:SF17 | SMART:SM00382 | SMART:SM01086 |
SUPFAM:SSF52540 | SUPFAM:SSF81923 | UniParc:UPI000B487FF8 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:515709444..515725317
Molecular Weight (calculated)
91463.5 Da
IEP (calculated)
8.143
GRAVY (calculated)
-0.223
Length
834 amino acids
Sequence
(BLAST)
(BLAST)
001: SRHKQIPFLP SSSAAPQRIS IHHREACRAA VGKGGPAQAA TGLATDVPFS GASKRVFVAA VEFSRNMGCN FISPDHIALG LFDLDDPTTN SILKSLGVVP
101: AQLAKQALTR VKGELAKDGR EPLGLSSFKL RDKSTAGNGR TGIAKYSNKK KEKSALAQFC IDLTMRASGG FIDPVIGRAK EIERVVQIIC RRTKNNPILL
201: GEAGVGKTAI AEGLALKIAN GDVPIFLVGK RILSLDVALL MAGAKERGEL EARVTSLIRE VRKADDVILF IDEVHTLIGS GIAGRGNKGA GLDIANLLKP
301: ALARGELQCI ASTTLDEHRL HFEKDKALAR RFQPVFVNEP SQEDAVKILL GLREKYETYH KCKYTLEGIN AAVYLSMRYI PDRHLPDKVI DLIDEAGSRA
401: RMESFKKKKE EQCSIILKSP DEYWQEIRAV QAMHEVAQTN RLKYSLNEND QENEVNVEVL DDSKTSPRTT PSTSADEPSV VGSEEIARVT SLWSGIPVQQ
501: LTADERKLLV GLDDELRKRV IGQDDAVVAI SRAVKRSRVG MSDPDRPIAT LLFCGPTGVG KTELTKALAS TYFGSESAMV RLDMSEYMER HAVSKLIGSP
601: PGYMGFGEGG TLTEAVRRKP FTVVLFDEIE KAHPDIFNIL LQVFEDGHLT DSQGRRVSFK NTLIVMTSNV GSTSISKGTM SMGFQTQSDT EENTYAVMKS
701: LVMEELKAFF RPELLNRMDE VVVFRPLEKT QMLAILNIIM EEVKGRLLAL GIGLVVSDAM KNMISQQGYD KSYGARPLRR AVTQLVEDVI SEAILSGQYK
801: PGDTIMMDTD DKGKPCLSRL NDQTVQVSDP TPTL
101: AQLAKQALTR VKGELAKDGR EPLGLSSFKL RDKSTAGNGR TGIAKYSNKK KEKSALAQFC IDLTMRASGG FIDPVIGRAK EIERVVQIIC RRTKNNPILL
201: GEAGVGKTAI AEGLALKIAN GDVPIFLVGK RILSLDVALL MAGAKERGEL EARVTSLIRE VRKADDVILF IDEVHTLIGS GIAGRGNKGA GLDIANLLKP
301: ALARGELQCI ASTTLDEHRL HFEKDKALAR RFQPVFVNEP SQEDAVKILL GLREKYETYH KCKYTLEGIN AAVYLSMRYI PDRHLPDKVI DLIDEAGSRA
401: RMESFKKKKE EQCSIILKSP DEYWQEIRAV QAMHEVAQTN RLKYSLNEND QENEVNVEVL DDSKTSPRTT PSTSADEPSV VGSEEIARVT SLWSGIPVQQ
501: LTADERKLLV GLDDELRKRV IGQDDAVVAI SRAVKRSRVG MSDPDRPIAT LLFCGPTGVG KTELTKALAS TYFGSESAMV RLDMSEYMER HAVSKLIGSP
601: PGYMGFGEGG TLTEAVRRKP FTVVLFDEIE KAHPDIFNIL LQVFEDGHLT DSQGRRVSFK NTLIVMTSNV GSTSISKGTM SMGFQTQSDT EENTYAVMKS
701: LVMEELKAFF RPELLNRMDE VVVFRPLEKT QMLAILNIIM EEVKGRLLAL GIGLVVSDAM KNMISQQGYD KSYGARPLRR AVTQLVEDVI SEAILSGQYK
801: PGDTIMMDTD DKGKPCLSRL NDQTVQVSDP TPTL
001: MEVLSTSSPL TLHSHRLLSA SSSSSHVTSI AASSLSSFAS SYLGISLSNR TIHRFSTTPT NLRRFPQRKR KKFTPISAVF ERFTERAIRA IIFSQKEAKS
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA
Arabidopsis Description
CLPDChaperone protein ClpD, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42762]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.