Factsheet for HORVU5Hr1G102460.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G008950.1	Barley	cytosol, plastid	64.29	41.6
HORVU4Hr1G008860.1	Barley	cytosol, peroxisome	55.84	39.27
HORVU6Hr1G063810.3	Barley	plastid	63.64	34.75
HORVU7Hr1G008380.2	Barley	cytosol	60.39	31.85
HORVU5Hr1G123460.3	Barley	mitochondrion	66.88	21.59
TraesCS5B01G422900.1	Wheat	cytosol	85.71	21.22
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	90.26	20.2
TraesCS5B01G423000.1	Wheat	cytosol	88.96	19.88
HORVU7Hr1G105430.1	Barley	cytosol	72.08	19.79
TraesCS5D01G429600.1	Wheat	mitochondrion	87.66	19.62
HORVU5Hr1G102440.2	Barley	mitochondrion, plastid	81.17	18.71
HORVU7Hr1G105530.1	Barley	cytosol	72.73	17.05
HORVU7Hr1G008940.2	Barley	cytosol	64.94	15.75
HORVU7Hr1G105270.3	Barley	cytosol	70.13	15.13
HORVU1Hr1G068970.1	Barley	cytosol	66.88	14.29
OQU85081	Sorghum	mitochondrion, plastid	62.34	13.37
OQU81585	Sorghum	cytosol	50.0	11.92
HORVU5Hr1G081860.1	Barley	cytosol	44.81	9.03
HORVU3Hr1G071120.7	Barley	cytosol	48.7	8.21
HORVU1Hr1G076190.4	Barley	nucleus	48.7	8.19
HORVU2Hr1G071080.3	Barley	plastid	48.05	8.07
HORVU2Hr1G072020.5	Barley	plastid	43.51	8.03
HORVU4Hr1G014120.2	Barley	plastid	48.7	8.0
HORVU6Hr1G028690.1	Barley	mitochondrion	49.35	7.72
HORVU5Hr1G031470.6	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	47.4	7.5
HORVU4Hr1G090440.2	Barley	plastid	50.0	7.28
HORVU7Hr1G009000.2	Barley	cytosol	1.3	0.57
HORVU7Hr1G035110.4	Barley	cytosol	1.3	0.45
HORVU1Hr1G076100.1	Barley	cytosol	0.0	0.0
KRH63249	Soybean	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G102460.1	EnsemblPlantsGene:HORVU5Hr1G102460	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B_CS1	InterPro:P-loop_NTPase	PANTHER:PTHR11638
PANTHER:PTHR11638:SF100	PFAM:PF00004	ScanProsite:PS00870	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000B46435E
UniProt:A0A287SIF9	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:614423969..614424664

Molecular Weight (calculated)

16113.8 Da

IEP (calculated)

9.938

GRAVY (calculated)

0.144

Length

154 amino acids

Sequence
(BLAST)

001: MTSKNVGLVV GRDDEIDRVI SILCRKTKNC AALVGHAGVG KTAIAEGLAQ RIATGKVPAA LAGARVIEID LGGMVAGAVL RSMFEERMKS VIKQAENAGG
101: KIILFINEMH DVIPGAGDSH GNTDASSMLK PALASGRIRR VGATTFDAWL PQLH

Best Arabidopsis Sequence Match ( AT1G74310.2 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVSLFT

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.