Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G429600.1 | Wheat | mitochondrion | 95.98 | 86.77 |
| HORVU5Hr1G102460.1 | Barley | cytosol | 21.22 | 85.71 |
| TraesCS5B01G423000.1 | Wheat | cytosol | 92.28 | 83.31 |
| TraesCS5B01G422800.1 | Wheat | cytosol | 83.12 | 77.28 |
| TraesCS5B01G554000.1 | Wheat | cytosol | 66.08 | 71.48 |
| TraesCS7B01G357500.1 | Wheat | cytosol | 71.7 | 68.2 |
| TraesCS7B01G357600.2 | Wheat | cytosol | 72.03 | 66.47 |
| TraesCS7B01G357400.1 | Wheat | cytosol | 69.94 | 65.22 |
| TraesCS4B01G046000.1 | Wheat | cytosol | 69.45 | 65.16 |
| TraesCS5B01G537100.1 | Wheat | mitochondrion | 68.33 | 62.96 |
| TraesCS2B01G158300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 68.17 | 61.45 |
| TraesCS1B01G315600.1 | Wheat | cytosol | 71.86 | 60.9 |
| TraesCS5B01G070000.1 | Wheat | mitochondrion | 45.98 | 60.34 |
| KRH63249 | Soybean | mitochondrion | 18.17 | 58.25 |
| OQU85081 | Sorghum | mitochondrion, plastid | 65.27 | 56.55 |
| OQU81585 | Sorghum | cytosol | 58.68 | 56.5 |
| TraesCS6B01G278000.1 | Wheat | cytosol | 68.01 | 51.52 |
| TraesCS4B01G090300.1 | Wheat | mitochondrion | 53.22 | 42.6 |
| TraesCS3B01G308100.1 | Wheat | cytosol | 54.98 | 37.46 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 54.82 | 37.19 |
| TraesCS4B01G082900.1 | Wheat | mitochondrion | 43.41 | 35.86 |
| TraesCS4B01G393100.1 | Wheat | cytosol | 51.61 | 35.55 |
| TraesCS2B01G304200.1 | Wheat | golgi | 44.37 | 30.1 |
| TraesCS5B01G112500.1 | Wheat | plastid | 44.37 | 30.0 |
| TraesCS6B01G233800.1 | Wheat | plastid | 44.05 | 29.91 |
| TraesCS4B01G380800.1 | Wheat | plastid | 46.46 | 29.64 |
| TraesCS4B01G083000.1 | Wheat | plastid | 43.09 | 28.51 |
| TraesCS6B01G174500.1 | Wheat | mitochondrion | 45.34 | 28.46 |
| TraesCS5B01G321800.1 | Wheat | plastid | 40.35 | 27.08 |
| TraesCS2B01G307500.1 | Wheat | plastid | 40.35 | 26.59 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:ClpA/B |
| InterPro:ClpA/B_CS1 | InterPro:Clp_ATPase_C | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 |
| PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS5B01G422900 |
| EnsemblPlants:TraesCS5B01G422900.1 | TIGR:cd00009 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:-:598754070..598756663
Molecular Weight (calculated)
67452.1 Da
IEP (calculated)
7.206
GRAVY (calculated)
-0.036
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGKTVGLVV GRDDEIDRVI SILCRKTKNC AALVGHAGVG KTAIAEGLAQ RIVTGKVPAA LAGARVVEID LGAMVAGTVM RGMFEERMKS VIKQAENTGS
101: KIILFIDEMH VLPRAGDSHG NTDASSLLKP ALARGRIRCV GATTFDGYRN YIEKDPALER RFQKVHIEEP STQATIGILR GLKQQFEQHH GLEIQDAALV
201: AAAQLAARYI TGRQFPDKAI DLIDEACTAT IKRAISADPM KEAAVVPNDV AQVVSQWTGI PVCTLEQEEK DKLIHLADRL HERVVGQDEA VNLVAETVLC
301: SMAGLDHPGQ PIGSFLFLGS TGVGKTELAK ALAEQLFGSE KMLVRFDMSE YVGTGSISRL IGAPPSHDGY DDGGQLTEKV RNRPYSVILF DEVEKADPSV
401: LNIFIQLLDD GVLTDGKGRT VDFKNTVIIM TSNLGAEHLT SGMAGEITMD AARDLLMKQV QKHFKPEFLN RLSEIVVFEL LLHDKLKEIV KIQMKSVIAR
501: VADKGISLLA SDAALDVILS ESYNPMYGAR PIRRWLEKNV MTKLSQMLVK GEASEGSTIT IGATDNRNML KYEVAKKAEL SGVVRNTDSS GMAAVVSPIK
601: RIVSLLARVT LKHPDGSALK TL
101: KIILFIDEMH VLPRAGDSHG NTDASSLLKP ALARGRIRCV GATTFDGYRN YIEKDPALER RFQKVHIEEP STQATIGILR GLKQQFEQHH GLEIQDAALV
201: AAAQLAARYI TGRQFPDKAI DLIDEACTAT IKRAISADPM KEAAVVPNDV AQVVSQWTGI PVCTLEQEEK DKLIHLADRL HERVVGQDEA VNLVAETVLC
301: SMAGLDHPGQ PIGSFLFLGS TGVGKTELAK ALAEQLFGSE KMLVRFDMSE YVGTGSISRL IGAPPSHDGY DDGGQLTEKV RNRPYSVILF DEVEKADPSV
401: LNIFIQLLDD GVLTDGKGRT VDFKNTVIIM TSNLGAEHLT SGMAGEITMD AARDLLMKQV QKHFKPEFLN RLSEIVVFEL LLHDKLKEIV KIQMKSVIAR
501: VADKGISLLA SDAALDVILS ESYNPMYGAR PIRRWLEKNV MTKLSQMLVK GEASEGSTIT IGATDNRNML KYEVAKKAEL SGVVRNTDSS GMAAVVSPIK
601: RIVSLLARVT LKHPDGSALK TL
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.