Factsheet for TraesCS5B01G321800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G321300.1	Wheat	plastid	98.38	98.49
HORVU5Hr1G081860.1	Barley	cytosol	81.12	98.43
TraesCS5D01G328100.1	Wheat	plastid	97.84	97.53
Os02t0526400-01	Rice	cytosol, plasma membrane	76.05	85.77
Zm00001d016664_P001	Maize	plastid	84.36	82.58
EES05165	Sorghum	plastid	84.14	81.5
TraesCS2B01G307500.1	Wheat	plastid	74.87	73.52
GSMUA_Achr6P23780_001	Banana	cytosol	61.92	67.93
CDY38846	Canola	plastid	60.41	60.15
Bra029193.1-P	Field mustard	plastid	60.63	59.6
VIT_19s0014g00020.t01	Wine grape	plastid	60.63	59.41
AT5G51070.1	Thale cress	plastid	60.41	59.26
CDX71686	Canola	plastid	59.55	59.23
CDY32646	Canola	plastid	59.65	59.21
KRH63903	Soybean	plastid	58.79	57.61
Solyc03g117950.2.1	Tomato	nucleus	59.44	57.16
PGSC0003DMT400036893	Potato	plastid	59.33	56.99
KRH54048	Soybean	plastid	58.36	56.95
GSMUA_Achr10P...	Banana	plastid	59.55	55.7
TraesCS4B01G082900.1	Wheat	mitochondrion	36.25	44.62
TraesCS2B01G304200.1	Wheat	golgi	43.8	44.27
TraesCS6B01G233800.1	Wheat	plastid	43.69	44.21
TraesCS5B01G554000.1	Wheat	cytosol	27.4	44.17
TraesCS5B01G112500.1	Wheat	plastid	43.69	44.02
TraesCS4B01G046000.1	Wheat	cytosol	29.77	41.63
TraesCS4B01G083000.1	Wheat	plastid	42.18	41.6
TraesCS5B01G422800.1	Wheat	cytosol	29.13	40.36
TraesCS5B01G422900.1	Wheat	cytosol	27.08	40.35
TraesCS5B01G537100.1	Wheat	mitochondrion	29.23	40.15
TraesCS7B01G357500.1	Wheat	cytosol	28.26	40.06
TraesCS2B01G158300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	29.56	39.71
TraesCS7B01G357600.2	Wheat	cytosol	28.37	39.02
TraesCS1B01G315600.1	Wheat	cytosol	30.74	38.83
TraesCS5B01G423000.1	Wheat	cytosol	28.48	38.32
TraesCS7B01G357400.1	Wheat	cytosol	27.51	38.23
TraesCS4B01G380800.1	Wheat	plastid	38.4	36.51
TraesCS1B01G352400.1	Wheat	cytosol, golgi	35.92	36.31
TraesCS5B01G070000.1	Wheat	mitochondrion	18.45	36.08
TraesCS4B01G090300.1	Wheat	mitochondrion	30.2	36.04
TraesCS3B01G308100.1	Wheat	cytosol	35.17	35.71
TraesCS6B01G174500.1	Wheat	mitochondrion	37.76	35.32
TraesCS4B01G393100.1	Wheat	cytosol	34.2	35.11
TraesCS6B01G278000.1	Wheat	cytosol	29.99	33.86

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:19.4.2.9.5	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152
GO:GO:0019538	InterPro:IPR036628	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02861	PFAM:PF07724
PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871	PANTHER:PTHR43572	PANTHER:PTHR43572:SF17
SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	SUPFAM:SSF81923	EnsemblPlantsGene:TraesCS5B01G321800	EnsemblPlants:TraesCS5B01G321800.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:506789423..506793932

Molecular Weight (calculated)

100617.0 Da

IEP (calculated)

6.875

GRAVY (calculated)

-0.178

Length

927 amino acids

Sequence
(BLAST)

001: MEVCCCSTSS SLLAGGRFAA PVASARARQW GAAGGGRAVV LAHPPRPAAA ASRPARLARR GVIRAVFERF TERAVKAVVH SQKEARGLGE GAVAPRHLLL
101: GLVAEDRSAG GFLSSGITVE RAREECRGLI GGAAQKAGGL DTDVPFDGGC RRVFEVAVEL SRNMGCSFIS PEHLAIALFT LDDPTTNNLL RSLGADPSQL
201: ASVAVTRLHE ELAKDGRDLA GASSLKVPEK APAGAGAGRS AFSKSLSKKK DKGALDQFCL DLTTQASGGF IDPIIGREEE IERVVQIICR RTKNNPILLG
301: EAGVGKTAIA EGLALRIANG DVPIFLVAKR IMSLDIGLLI AGAKERGELE SRITSLIREV REAGDVILFI DEVHNLVGSG TAGKGKGAGL DISNLLKPPL
401: ARGELQCIAA TTLDEHRMHF EKDKALNRRF QPVFVDEPSQ EDAVKILLGL RENYEAYHKC KFTLEAINAA VYLSARYIPD RQLPDKAIDL IDEAGSRARI
501: ESYQKKKEGQ SSVLLKEPDE YWQEIKAVQA MHEVVLSNKM KYSPNENKQQ NASVNTEAPH QDKAESTIEE PIVVGTEEIA RVASLWSGIP VQQLTADDKK
601: ILVGLDDELR KRVIGQDDAV AAISRAVKRS RVGLSDPDRP IATMLFCGPT GVGKTELTKA LAASYFGSES AMLRLDMSEY MERHTVSKLI GSPPGYVGYG
701: ETGTLTEAVR RKPFTVVLLD EIEKAHPDIF NILLQIFEDG HLADSQGRRV SFKNTLIVMT SNVGSTSISN GRRSMGFSTE DTESSRYVAV KSLVMEELKG
801: FFRPELLNRI DETVVFRPLE QTQMLAILDI LLEELKGKLL AVGIGLEVSD AMKELICREG YDKNYGARPL RRAITQLMED VISEAILFGE YKPGDTILVD
901: TDSKGKPCLS RLNQPPIVQV SDSTRTF

Best Arabidopsis Sequence Match ( AT5G51070.1 )
(BLAST)

001: MEVLSTSSPL TLHSHRLLSA SSSSSHVTSI AASSLSSFAS SYLGISLSNR TIHRFSTTPT NLRRFPQRKR KKFTPISAVF ERFTERAIRA IIFSQKEAKS
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA

Arabidopsis Description

CLPDChaperone protein ClpD, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42762]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.