Factsheet for TraesCS2B01G158300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, mitochondrion
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G136900.1	Wheat	cytosol	73.62	97.32
TraesCS4B01G046000.1	Wheat	cytosol	66.23	68.93
TraesCS5B01G554000.1	Wheat	cytosol	57.39	68.87
TraesCS5B01G422900.1	Wheat	cytosol	61.45	68.17
TraesCS7B01G357500.1	Wheat	cytosol	63.77	67.28
TraesCS5B01G422800.1	Wheat	cytosol	65.07	67.12
TraesCS7B01G357600.2	Wheat	cytosol	64.35	65.88
TraesCS7B01G357400.1	Wheat	cytosol	61.3	63.42
TraesCS5B01G537100.1	Wheat	mitochondrion	61.3	62.67
TraesCS5B01G423000.1	Wheat	cytosol	62.32	62.41
TraesCS1B01G315600.1	Wheat	cytosol	65.8	61.85
KRH63249	Soybean	mitochondrion	17.1	60.82
TraesCS5B01G070000.1	Wheat	mitochondrion	40.58	59.07
OQU85081	Sorghum	mitochondrion, plastid	60.0	57.66
OQU81585	Sorghum	cytosol	51.16	54.64
TraesCS6B01G278000.1	Wheat	cytosol	61.59	51.77
TraesCS4B01G090300.1	Wheat	mitochondrion	49.42	43.89
TraesCS3B01G308100.1	Wheat	cytosol	51.3	38.77
TraesCS1B01G352400.1	Wheat	cytosol, golgi	50.87	38.28
TraesCS4B01G393100.1	Wheat	cytosol	49.13	37.54
TraesCS4B01G082900.1	Wheat	mitochondrion	40.0	36.65
TraesCS5B01G112500.1	Wheat	plastid	43.48	32.61
TraesCS6B01G233800.1	Wheat	plastid	42.9	32.31
TraesCS2B01G304200.1	Wheat	golgi	42.9	32.28
TraesCS4B01G380800.1	Wheat	plastid	43.62	30.87
TraesCS6B01G174500.1	Wheat	mitochondrion	43.77	30.47
TraesCS4B01G083000.1	Wheat	plastid	41.01	30.11
TraesCS5B01G321800.1	Wheat	plastid	39.71	29.56
TraesCS2B01G307500.1	Wheat	plastid	39.71	29.03

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100
SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS2B01G158300	EnsemblPlants:TraesCS2B01G158300.1	TIGR:cd00009
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:132277795..132280398

Molecular Weight (calculated)

76466.6 Da

IEP (calculated)

8.874

GRAVY (calculated)

-0.207

Length

690 amino acids

Sequence
(BLAST)

001: MIRWKVNKKR RQPPPRDDRV TSVRAITVQR PPVSGQLLLE RACCTVVALA TSALCHWAWS YFQSRKCLRT YGRDMTGEGD PVIGRDDEID RVVDILCRRT
101: KNCAALVGAA GVGKTAVAEG LAQRIASGAV PDALVGARVV EVDLAAMVAG TRYRGMFEER MKNVIKRAEA SNGKIILFVD EMHMLYSAGS SRTNCTSASN
201: MLKPALARGR IRCVGATTFD EYRQYVEKDP ALERRFQKVH VGEPSIEATI AILRGLKQRF QDHHGHEIQD AALVAAAHLG ARYITGRQFP DKAIDLIDEA
301: CTFIARKMKQ IDNQLLVDDN TTPNSLNDAN KKVVVNPKSS STNRVKKAIV DPNDVAQVVS RWTGIPVATL CEEEKDKLIH IGDRLHERVI GQDEAVNLVA
401: QAVLRSRAGL DQPSQPTGSF LFLGPSGVGK TELAKALAEQ LFDSEKMLVR VDMSEYATAG SVTRLIGAPP SYIGYEDSGQ LTEKVRRHPY SLILFDEVEK
501: AHPSVFNIFL QILDDGMLTD GKGRTVDFKN TIIIMTSNLG SEYLTTKMTG EKPLEVARNL VMEKVQKFFK PELLNRISEI VIFESLSYEQ MKEVAKIQIK
601: NVVARVANKG ISLSTTDALL DVIMSESHNP MYGARPIRRW VERNVITMLS EMLVKGEAGE GSTIFIDATD DKKGLKYEVV KMPVLDFSSV

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.