Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G063810.3 | Barley | plastid | 28.01 | 81.56 |
| Os02t0537400-01 | Rice | cytosol | 38.73 | 72.6 |
| TraesCS5B01G554000.1 | Wheat | cytosol | 48.48 | 69.22 |
| TraesCS5B01G422900.1 | Wheat | cytosol | 51.52 | 68.01 |
| TraesCS7B01G357500.1 | Wheat | cytosol | 53.96 | 67.74 |
| TraesCS5B01G422800.1 | Wheat | cytosol | 55.18 | 67.71 |
| TraesCS7B01G357600.2 | Wheat | cytosol | 54.81 | 66.77 |
| TraesCS4B01G046000.1 | Wheat | cytosol | 52.74 | 65.31 |
| TraesCS7B01G357400.1 | Wheat | cytosol | 52.98 | 65.22 |
| TraesCS5B01G423000.1 | Wheat | cytosol | 53.72 | 64.01 |
| TraesCS5B01G537100.1 | Wheat | mitochondrion | 51.77 | 62.96 |
| OQU85081 | Sorghum | mitochondrion, plastid | 55.05 | 62.95 |
| TraesCS1B01G315600.1 | Wheat | cytosol | 55.79 | 62.4 |
| TraesCS2B01G158300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 51.77 | 61.59 |
| OQU81585 | Sorghum | cytosol | 47.14 | 59.91 |
| TraesCS5B01G070000.1 | Wheat | mitochondrion | 34.47 | 59.7 |
| KRH63249 | Soybean | mitochondrion | 13.15 | 55.67 |
| TraesCS4B01G090300.1 | Wheat | mitochondrion | 43.73 | 46.2 |
| TraesCS3B01G308100.1 | Wheat | cytosol | 45.55 | 40.96 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 44.82 | 40.13 |
| TraesCS4B01G393100.1 | Wheat | cytosol | 43.24 | 39.31 |
| TraesCS4B01G082900.1 | Wheat | mitochondrion | 33.01 | 35.99 |
| TraesCS5B01G112500.1 | Wheat | plastid | 36.78 | 32.83 |
| TraesCS2B01G304200.1 | Wheat | golgi | 36.42 | 32.61 |
| TraesCS6B01G233800.1 | Wheat | plastid | 36.3 | 32.53 |
| TraesCS4B01G380800.1 | Wheat | plastid | 38.61 | 32.51 |
| TraesCS6B01G174500.1 | Wheat | mitochondrion | 38.0 | 31.48 |
| TraesCS4B01G083000.1 | Wheat | plastid | 34.96 | 30.53 |
| TraesCS5B01G321800.1 | Wheat | plastid | 33.86 | 29.99 |
| TraesCS2B01G307500.1 | Wheat | plastid | 33.74 | 29.34 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:ClpA/B |
| InterPro:Clp_ATPase_C | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 |
| SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS6B01G278000 | EnsemblPlants:TraesCS6B01G278000.1 | TIGR:cd00009 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:503005024..503008858
Molecular Weight (calculated)
88599.4 Da
IEP (calculated)
8.041
GRAVY (calculated)
-0.221
Length
821 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNGSTPDPL HPSTGGVKYV PSVFPSGESD DDEFPAYGEF SLRLRPRRNL RYGGVDEESR PSSPALLPHS RPSCSVLRGS RLHTESVCHR SSDSLEAPLV
101: NLKQQRRRPL ASSAAAPASG GVAPAHFVTP AAGTASPVAF STSPSPIDLT AAADAPGGRT SGSVYRPPVV KTRTTLNSSA GGRRGSLVGA APKAAPTPKE
201: TALSTYGRDM TVVAGMTDPV IGRDDEIDRV VCILCRRTKN SALLVGAPGV GKTAIAEGLA RRIAGGMVPA ALAGARVVEV DLGAMVAGTQ YRGMFEQRLK
301: DVIKEAEDAD GQVVLFIDEV HMLVGSGKTK GGSMDGANLL KPALARGRIR CVGATTFDEY RKYIEKDAAL ERRFQKVHVE EPSTQATICI LRGLKQRYEE
401: HHGLKIQDAA LVAAAQLAGR YITGRQFPDK AIDLIDEACS TTRMQIDSQR QWSATQSTST RAVREGVLGP DHVAQVVSRW TGIPVATLDE EEKDKLIHLA
501: NRLHERVVAG LDQSGQPIGS FLFLGPTGVG KTELAKALAE QLFNTEKMLV RFDMSKYVNS GSVLRLIGAP PSYHGHEDGG QLTEKIRRRP YSVILFDEVE
601: KADPSVFNVF LQLLDDGMLT DGKGRTVDFK NTIIIMTSNM GAEHLTAGMN GETTMEAAHG LVMEQVQKCF KPELLNRLSE VVIFEPLSHD KLKEVVKIQM
701: KIIIASVANK GISLVASDDA LDVILSESYN PMYGARPIRR WVHKNVMTKL SELLVKGEVD EGSMVSVDAT TDKKGLEYQV VKKVIEAQGK KLVMEVPSDS
801: YDSDDVVEVF PVAKKAKVVG F
101: NLKQQRRRPL ASSAAAPASG GVAPAHFVTP AAGTASPVAF STSPSPIDLT AAADAPGGRT SGSVYRPPVV KTRTTLNSSA GGRRGSLVGA APKAAPTPKE
201: TALSTYGRDM TVVAGMTDPV IGRDDEIDRV VCILCRRTKN SALLVGAPGV GKTAIAEGLA RRIAGGMVPA ALAGARVVEV DLGAMVAGTQ YRGMFEQRLK
301: DVIKEAEDAD GQVVLFIDEV HMLVGSGKTK GGSMDGANLL KPALARGRIR CVGATTFDEY RKYIEKDAAL ERRFQKVHVE EPSTQATICI LRGLKQRYEE
401: HHGLKIQDAA LVAAAQLAGR YITGRQFPDK AIDLIDEACS TTRMQIDSQR QWSATQSTST RAVREGVLGP DHVAQVVSRW TGIPVATLDE EEKDKLIHLA
501: NRLHERVVAG LDQSGQPIGS FLFLGPTGVG KTELAKALAE QLFNTEKMLV RFDMSKYVNS GSVLRLIGAP PSYHGHEDGG QLTEKIRRRP YSVILFDEVE
601: KADPSVFNVF LQLLDDGMLT DGKGRTVDFK NTIIIMTSNM GAEHLTAGMN GETTMEAAHG LVMEQVQKCF KPELLNRLSE VVIFEPLSHD KLKEVVKIQM
701: KIIIASVANK GISLVASDDA LDVILSESYN PMYGARPIRR WVHKNVMTKL SELLVKGEVD EGSMVSVDAT TDKKGLEYQV VKKVIEAQGK KLVMEVPSDS
801: YDSDDVVEVF PVAKKAKVVG F
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.