Factsheet for TraesCS5B01G070000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G074000.1	Wheat	mitochondrion	90.51	61.9
TraesCS5A01G062800.1	Wheat	mitochondrion	86.92	59.37
KRH63249	Soybean	mitochondrion	23.42	57.22
TraesCS5B01G554000.1	Wheat	cytosol	57.38	47.3
TraesCS5B01G422900.1	Wheat	cytosol	60.34	45.98
TraesCS7B01G357500.1	Wheat	cytosol	60.97	44.19
TraesCS5B01G422800.1	Wheat	cytosol	62.24	44.1
TraesCS4B01G046000.1	Wheat	cytosol	60.97	43.59
TraesCS7B01G357600.2	Wheat	cytosol	61.39	43.18
TraesCS7B01G357400.1	Wheat	cytosol	59.07	41.98
TraesCS5B01G423000.1	Wheat	cytosol	60.34	41.51
TraesCS2B01G158300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	59.07	40.58
TraesCS5B01G537100.1	Wheat	mitochondrion	56.96	40.0
OQU81585	Sorghum	cytosol	54.22	39.78
TraesCS1B01G315600.1	Wheat	cytosol	60.97	39.37
OQU85081	Sorghum	mitochondrion, plastid	56.75	37.47
TraesCS6B01G278000.1	Wheat	cytosol	59.7	34.47
TraesCS4B01G090300.1	Wheat	mitochondrion	46.41	28.31
TraesCS3B01G308100.1	Wheat	cytosol	49.16	25.52
TraesCS1B01G352400.1	Wheat	cytosol, golgi	48.73	25.19
TraesCS4B01G393100.1	Wheat	cytosol	45.78	24.03
TraesCS4B01G082900.1	Wheat	mitochondrion	37.34	23.51
TraesCS5B01G112500.1	Wheat	plastid	38.82	20.0
TraesCS4B01G380800.1	Wheat	plastid	40.08	19.49
TraesCS2B01G304200.1	Wheat	golgi	37.34	19.3
TraesCS6B01G233800.1	Wheat	plastid	37.13	19.21
TraesCS6B01G174500.1	Wheat	mitochondrion	39.24	18.77
TraesCS5B01G321800.1	Wheat	plastid	36.08	18.45
TraesCS2B01G307500.1	Wheat	plastid	36.71	18.43
TraesCS4B01G083000.1	Wheat	plastid	36.08	18.19

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382
SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5B01G070000	EnsemblPlants:TraesCS5B01G070000.1	TIGR:cd00009	SEG:seg

Description

No Description!

Coordinates

chr5B:-:79812714..79814567

Molecular Weight (calculated)

52246.4 Da

IEP (calculated)

8.847

GRAVY (calculated)

-0.236

Length

474 amino acids

Sequence
(BLAST)

001: MPHSSGGSKR FMLRNQACRR PSPFCRGLNS GTKTTMSWKF RMLLWLLPQS LLAAISLFPD KAIDLIDEAC AATRMLVDRE SEATGTRTQS YNKKEVTAQS
101: RSIKAVKKGI VGPSQVAQVV SLWTGIPVAA IDREEKEKLL HLAEKLHERV VGQDEAVNLV AQTVLRSRVG LDQPGQPIGS FLFLGSTGVG KTELAKALAE
201: QLFDNENMLV RFDMSEYGTK GSVLRLIGAP PSYYGYDDGG QLTEKVKSHP YSVILFDEVE KAHREVYNVF LQLLDDGLLT DGKGRTVDFK NTIIIMTSNL
301: GSKHLAAGMV GKNTMQETHN LVMKEVRKRF KPELLNRLSE IVIFEPLSRD KLKEIVKIQM KGAVARVAKK GISLHASDAA LDVILSESYE PMYGARPIKR
401: WIQKNVMNTI CEMLVKGEAG EGSTISIDAT DHNKGLKYEV VKKAADPSGN ILVPAPEPLA CPDEESDDSV MVTS

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.