Factsheet for TraesCS5A01G062800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

endoplasmic reticulum 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	endoplasmic reticulum, mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G074000.1	Wheat	mitochondrion	93.08	93.22
TraesCS5B01G070000.1	Wheat	mitochondrion	59.37	86.92
TraesCS3A01G124200.1	Wheat	mitochondrion	64.55	77.91
TraesCS7A01G456700.1	Wheat	mitochondrion	48.99	71.88
TraesCS4A01G324200.1	Wheat	cytosol	10.66	68.52
TraesCS3A01G090400.1	Wheat	cytosol	50.29	67.37
Os02t0537400-01	Rice	cytosol	42.36	67.12
TraesCS4A01G267200.1	Wheat	cytosol, plastid	64.7	66.92
TraesCS1A01G304800.1	Wheat	cytosol	64.7	66.13
TraesCS3A01G106800.1	Wheat	cytosol	59.94	65.72
TraesCS5A01G046800.1	Wheat	cytosol	46.11	65.31
TraesCS7A01G048300.1	Wheat	cytosol	56.34	64.95
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	58.36	63.88
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	57.2	63.83
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	57.06	63.67
TraesCS4A01G324100.1	Wheat	cytosol	58.5	63.64
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	56.92	63.5
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	54.18	62.88
TraesCS7A01G048400.1	Wheat	cytosol	57.35	61.9
TraesCS7A01G050700.1	Wheat	extracellular	58.79	61.45
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	58.65	61.3
TraesCS4A01G443200.1	Wheat	cytosol	56.05	60.5
TraesCS4A01G443300.1	Wheat	plastid	55.76	60.19
OQU85081	Sorghum	mitochondrion, plastid	60.95	58.91
OQU81585	Sorghum	cytosol	53.75	57.74
KRH63249	Soybean	mitochondrion	15.99	57.22
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	48.56	57.02
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	50.86	45.67
TraesCS3A01G274400.1	Wheat	cytosol	52.59	39.98
TraesCS1A01G340100.1	Wheat	nucleus	51.87	39.22
TraesCS5A01G118900.1	Wheat	unclear	42.22	31.85
TraesCS5A01G547300.1	Wheat	golgi, plastid	44.67	31.83
TraesCS6A01G195200.1	Wheat	plastid	41.5	31.44
TraesCS4A01G232900.1	Wheat	cytosol	6.2	31.16
TraesCS6A01G146400.1	Wheat	mitochondrion	44.09	30.88
TraesCS2A01G287300.2	Wheat	plastid	39.48	30.61
TraesCS5A01G321300.1	Wheat	plastid	39.77	29.81
TraesCS4A01G232800.1	Wheat	plastid	40.2	29.74
TraesCS2A01G291100.1	Wheat	plastid	40.49	29.7

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5A01G062800
EnsemblPlants:TraesCS5A01G062800.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:-:67520617..67523183

Molecular Weight (calculated)

75822.9 Da

IEP (calculated)

7.219

GRAVY (calculated)

-0.160

Length

694 amino acids

Sequence
(BLAST)

001: MGGSKLGVVA SRHLARVWRE IEPVLWLGAT AGLCWAAWRY YQSCACLRSY GRKMGALSEG EGDPVIGRDK EIDRVICILC RRTKNCAALV GEAGVGKTAI
101: IEGLTQRIAS GKVPASLAGA RVVEVDLGAM LAGTSLRGMF EERIKDVIKS AEDGDGKVIL FIDEMHMLLG AGDDVGGTDA ANLLKPALAR GRIRCVGATT
201: LKEYHRYIQP DAALERRFQK VHVKEPSVQA TVTILQGLKQ RYQDHHGLEI QDAALVAAAE LAGRYITDRH FPDKAIDLID EACATARMLL DNENEATGGT
301: MTRIYNKKEA TAQSRSINAV KKGIVDPSQV AQVVSLWTGI PVAAIDQEEK EKLLHLADKL HERVVGQDEA VNLVAQTVLR SRIGLDQPGQ PIGSFLFLGS
401: TGVGKTELAK ALAEQLFDNE NMLVRFDMSE YGTKGSVLRL IGAPPSYYGY DDGGQLTEKV KKHPYSVILF DEVEKAHRSV YNIFLQLLDD GLLTDGKGQT
501: VDFKNTLIIM TSNLGSKHLA AGMVGENTMQ ETHKLVMKEV RKRFKPELLN RLSEIVIFEP LSHDKLKEIV KIQMKGAAAR VAKKGISLHA SDATLDVILS
601: ESYEPMYGAR PIKRWIQKNV MNTICEMLVK GEVGEGSTIS IDAADHNKGL KYEVVKKAAD PSRNILVPAP EPLACPDEET DDSVMVTSLT KCLG

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.