Factsheet for TraesCS7A01G048400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G042900.1	Wheat	cytosol	95.18	95.18
TraesCS4A01G443200.1	Wheat	cytosol	91.45	91.45
TraesCS4A01G443300.1	Wheat	plastid	91.29	91.29
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	85.85	87.07
HORVU7Hr1G008380.2	Barley	cytosol	34.68	76.37
TraesCS7A01G048300.1	Wheat	cytosol	68.74	73.42
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	72.16	69.88
TraesCS7A01G050700.1	Wheat	extracellular	72.01	69.73
TraesCS5A01G046800.1	Wheat	cytosol	51.94	68.16
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	65.63	67.85
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	65.63	67.85
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	65.47	67.68
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	62.05	66.72
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	60.19	65.48
TraesCS7A01G456700.1	Wheat	mitochondrion	45.1	61.31
TraesCS3A01G106800.1	Wheat	cytosol	58.79	59.72
TraesCS3A01G124200.1	Wheat	mitochondrion	53.34	59.65
TraesCS3A01G090400.1	Wheat	cytosol	47.74	59.27
Os02t0537400-01	Rice	cytosol	39.97	58.68
TraesCS4A01G267200.1	Wheat	cytosol, plastid	60.96	58.42
TraesCS4A01G324200.1	Wheat	cytosol	9.64	57.41
TraesCS5A01G062800.1	Wheat	mitochondrion	61.9	57.35
TraesCS4A01G324100.1	Wheat	cytosol	55.99	56.43
TraesCS1A01G304800.1	Wheat	cytosol	59.41	56.26
OQU85081	Sorghum	mitochondrion, plastid	57.7	51.67
KRH63249	Soybean	mitochondrion	15.09	50.0
OQU81585	Sorghum	cytosol	50.08	49.85
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	50.7	42.17
TraesCS3A01G274400.1	Wheat	cytosol	53.5	37.68
TraesCS1A01G340100.1	Wheat	nucleus	52.88	37.04
TraesCS5A01G547300.1	Wheat	golgi, plastid	44.17	29.16
TraesCS5A01G118900.1	Wheat	unclear	40.75	28.48
TraesCS6A01G146400.1	Wheat	mitochondrion	43.86	28.46
TraesCS6A01G195200.1	Wheat	plastid	40.44	28.38
TraesCS5A01G321300.1	Wheat	plastid	39.97	27.75
TraesCS2A01G287300.2	Wheat	plastid	38.57	27.71
TraesCS4A01G232900.1	Wheat	cytosol	5.91	27.54
TraesCS4A01G232800.1	Wheat	plastid	39.5	27.08
TraesCS2A01G291100.1	Wheat	plastid	39.19	26.64

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS7A01G048400	EnsemblPlants:TraesCS7A01G048400.1	TIGR:cd00009	SEG:seg	:	:

Description

No Description!

Coordinates

chr7A:+:22665981..22668392

Molecular Weight (calculated)

70453.0 Da

IEP (calculated)

6.682

GRAVY (calculated)

-0.103

Length

643 amino acids

Sequence
(BLAST)

001: MSWSSPESML FIGASAVAST ALAWATWTLL DEFMYHRRPS DTNYDQLIGI KPLDATGSLR TLDAATTDPV IGRDDEIDRL VCILCRRTKN CAALVGPAGV
101: GKTAIVEGLA QRIAAGNVPD TLAGARIVEV DMGAMMAGTH WRGMFEQRIK DVIKEAEEAE GKVILFIDEM HMVVGAGGDK GGPIDAANIL KPALARGRIR
201: CVGATTSEEY EKYVQTDAAL ERRFQKVVVE EPSVHATVAI LQGLKHRYQE HHGLKIQDDA IVAAAHLAAR YITGRKFPDK AIDLMDEACA TTKMHVDKQT
301: TAEIVVSPGH VARVVSRWTK IPLATLDQED NDKLFHLAKK LHERVIGQDE AVNLVAQAVL RSRVGFGQIG QPISAFLFLG PVGVGKTELA KALAEKIFDN
401: EKALIHFDMS EYTDSGSVSR LTGGSRSYEE YGQLTEKVKR LPYSVILFDH VDKANASVFK VFHQLLDDGM LTDGKGQVVD FKNTIIIMTS NIGAEHLPSR
501: ITGKNAIKSE RDILMNQVKK RFKPELINRL SKVVIFEPLS HDELRKIVKI QMNNVISTVA NKGVSVLATD AALDVILSES HDPVDGARPI RRWMHNHVIT
601: ILSDMLVDGE ACAGSTISID AAVDDKSGLT FQVLKKQQEL ADQ

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.