Factsheet for TraesCS4A01G324200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G232900.1	Wheat	cytosol	27.78	21.74
TraesCS5B01G554000.1	Wheat	cytosol	96.3	18.09
Os02t0537400-01	Rice	cytosol	72.22	17.81
HORVU5Hr1G123460.3	Barley	mitochondrion	73.15	16.56
TraesCS4A01G324100.1	Wheat	cytosol	88.89	15.05
TraesCS7A01G456700.1	Wheat	mitochondrion	62.96	14.38
TraesCS3A01G090400.1	Wheat	cytosol	68.52	14.29
TraesCS5A01G046800.1	Wheat	cytosol	57.41	12.65
TraesCS3A01G106800.1	Wheat	cytosol	66.67	11.37
TraesCS7A01G048300.1	Wheat	cytosol	62.04	11.13
TraesCS1A01G304800.1	Wheat	cytosol	68.52	10.9
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	60.19	10.87
TraesCS5A01G062800.1	Wheat	mitochondrion	68.52	10.66
TraesCS4A01G267200.1	Wheat	cytosol, plastid	64.81	10.43
OQU81585	Sorghum	cytosol	62.04	10.37
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	59.26	10.29
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	59.26	10.29
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	59.26	10.29
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	60.19	10.25
TraesCS4A01G443200.1	Wheat	cytosol	59.26	9.95
TraesCS4A01G443300.1	Wheat	plastid	59.26	9.95
KRH63249	Soybean	mitochondrion	17.59	9.79
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	52.78	9.64
TraesCS7A01G048400.1	Wheat	cytosol	57.41	9.64
TraesCS3A01G124200.1	Wheat	mitochondrion	50.93	9.57
TraesCS7A01G050700.1	Wheat	extracellular	58.33	9.49
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	57.41	9.34
OQU85081	Sorghum	mitochondrion, plastid	59.26	8.91
TraesCS3A01G274400.1	Wheat	cytosol	62.04	7.34
TraesCS1A01G340100.1	Wheat	nucleus	60.19	7.08
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	47.22	6.6
TraesCS2A01G291100.1	Wheat	plastid	37.96	4.33
TraesCS2A01G287300.2	Wheat	plastid	34.26	4.13
TraesCS4A01G232800.1	Wheat	plastid	35.19	4.05
TraesCS5A01G321300.1	Wheat	plastid	34.26	4.0
TraesCS6A01G195200.1	Wheat	plastid	33.33	3.93
TraesCS5A01G118900.1	Wheat	unclear	33.33	3.91
TraesCS5A01G547300.1	Wheat	golgi, plastid	31.48	3.49
TraesCS6A01G146400.1	Wheat	mitochondrion	26.85	2.93

Protein Annotations

EnsemblPlants:TraesCS4A01G324200.1	EnsemblPlantsGene:TraesCS4A01G324200	Gene3D:1.10.8.60	Gene3D:3.40.50.300	InterPro:Clp_ATPase_C	InterPro:P-loop_NTPase
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	PFAM:PF10431	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr4A:-:611976530..611977103

Molecular Weight (calculated)

12233.0 Da

IEP (calculated)

9.893

GRAVY (calculated)

-0.207

Length

108 amino acids

Sequence
(BLAST)

001: MTSNLGAEHL IAGIRGENTM KDARDLLMKK VHQYFKPELL NRLSQIVVFD PFSHDQLMEV VKIQMKRATT RVAKKGISLS VSDGALDVIL SESYNPMYGA
101: RPIRSWVE

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.