Factsheet for TraesCS3A01G106800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G456700.1	Wheat	mitochondrion	50.39	67.44
TraesCS4A01G324200.1	Wheat	cytosol	11.37	66.67
TraesCS4A01G267200.1	Wheat	cytosol, plastid	68.56	64.68
TraesCS3A01G090400.1	Wheat	cytosol	52.76	64.48
TraesCS5B01G537100.1	Wheat	mitochondrion	68.72	64.44
Os02t0537400-01	Rice	cytosol	43.92	63.47
TraesCS5A01G046800.1	Wheat	cytosol	48.97	63.27
TraesCS1A01G304800.1	Wheat	cytosol	67.3	62.74
TraesCS3A01G124200.1	Wheat	mitochondrion	56.56	62.26
TraesCS7A01G048300.1	Wheat	cytosol	58.61	61.63
TraesCS4A01G324100.1	Wheat	cytosol	62.09	61.6
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	60.98	60.88
TraesCS5A01G062800.1	Wheat	mitochondrion	65.72	59.94
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	58.77	59.81
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	58.61	59.65
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	58.45	59.49
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	56.08	59.36
TraesCS7A01G048400.1	Wheat	cytosol	59.72	58.79
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	60.82	57.98
TraesCS4A01G443200.1	Wheat	cytosol	58.77	57.85
TraesCS7A01G050700.1	Wheat	extracellular	60.66	57.83
TraesCS4A01G443300.1	Wheat	plastid	58.61	57.7
HORVU4Hr1G008860.1	Barley	cytosol, peroxisome	19.59	56.62
KRH63249	Soybean	mitochondrion	17.06	55.67
OQU85081	Sorghum	mitochondrion, plastid	62.4	55.01
OQU81585	Sorghum	cytosol	55.77	54.64
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	49.76	53.3
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	54.5	44.63
TraesCS3A01G274400.1	Wheat	cytosol	54.19	37.57
TraesCS1A01G340100.1	Wheat	nucleus	53.55	36.93
TraesCS5A01G547300.1	Wheat	golgi, plastid	47.71	31.01
TraesCS6A01G195200.1	Wheat	plastid	44.87	31.0
TraesCS5A01G118900.1	Wheat	unclear	44.71	30.76
TraesCS2A01G287300.2	Wheat	plastid	42.65	30.17
TraesCS6A01G146400.1	Wheat	mitochondrion	46.6	29.77
TraesCS4A01G232900.1	Wheat	cytosol	6.32	28.99
TraesCS5A01G321300.1	Wheat	plastid	42.02	28.73
TraesCS4A01G232800.1	Wheat	plastid	42.34	28.57
TraesCS2A01G291100.1	Wheat	plastid	41.86	28.01

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3A01G106800
EnsemblPlants:TraesCS3A01G106800.1	TIGR:cd00009	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:71150223..71152591

Molecular Weight (calculated)

69163.1 Da

IEP (calculated)

8.046

GRAVY (calculated)

-0.045

Length

633 amino acids

Sequence
(BLAST)

001: MERGTTGSSG VPDDTSSSHV IKVSPREVLC VGAVCWAVWR YFRYITCLHT YGRDMTAMAG KADPVIGRDD EIDRVIRILC RRTKNCAALV GAAGVGKTAI
101: AEGLAQRIVA GKVPSKLAGA RVIELNLMAM VSGTMYVGMS EERMTDFLKK VAAARGKVIL FVDEMHMLLG AGAATGTHMD AANMLKPALA RGHIRCLGAT
201: TDDEYSMYIE KDPALERRFQ KVHVEEPSTH STIAILQGLK PRYQKHYGLE ILDATIDAAV HLADRYIAGR RFPDKAIDLI DEACTTLELG GENTVVAPNH
301: VAQVVSGWTG IPIATLNQEE SVKLIHLADR LHERIVGQDE AVNLVAEAVL RSRIGLHQAG QPIGSFLFLG TTGVGKTELA KALAEQLFGS EKMMLRFDMS
401: EYVSPESVLR LVGAPPSYHG YENGGQLTEK VRRRPYSVVL FDEVEKAYPS VLNVFLQLLD DGVLTDGKGH NVDFKNTIII MTSNVGAEHL NVGVVGEKTT
501: VASRNLLMKQ VQKCFKPEFI NRLSEIVVFE PLSHRQLKEI VNIQMKSAFA RVAGKGISLV LSDAALDVIL SESHNPLYGA RPIKRWIEKN IMTTISKMLV
601: NGEAVEGSTI SIDSTSDKKG LKYQLAKKNA TDP

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.