Factsheet for TraesCS7A01G050400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	97.75	97.75
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	95.82	95.82
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	95.66	95.66
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	95.66	95.66
TraesCSU01G102400.1	Wheat	endoplasmic reticulum	95.02	95.02
TraesCSU01G102300.1	Wheat	endoplasmic reticulum	95.02	95.02
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	90.35	93.98
TraesCS5A01G046800.1	Wheat	cytosol	67.2	85.31
TraesCS7A01G048300.1	Wheat	cytosol	67.2	69.44
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	69.29	67.98
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	70.1	65.66
TraesCS7A01G048400.1	Wheat	cytosol	67.85	65.63
TraesCS7A01G456700.1	Wheat	mitochondrion	49.68	65.33
TraesCS7A01G050700.1	Wheat	extracellular	69.45	65.06
TraesCS4A01G443200.1	Wheat	cytosol	67.04	64.85
TraesCS4A01G443300.1	Wheat	plastid	66.88	64.7
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	59.97	63.11
TraesCS3A01G090400.1	Wheat	cytosol	50.96	61.2
TraesCS4A01G324200.1	Wheat	cytosol	10.29	59.26
Os02t0537400-01	Rice	cytosol	41.64	59.13
TraesCS3A01G106800.1	Wheat	cytosol	59.49	58.45
TraesCS3A01G124200.1	Wheat	mitochondrion	53.38	57.74
TraesCS4A01G324100.1	Wheat	cytosol	59.16	57.68
TraesCS4A01G267200.1	Wheat	cytosol, plastid	61.58	57.08
TraesCS5A01G062800.1	Wheat	mitochondrion	63.67	57.06
TraesCS1A01G304800.1	Wheat	cytosol	61.41	56.26
KRH63249	Soybean	mitochondrion	16.24	52.06
OQU85081	Sorghum	mitochondrion, plastid	59.32	51.39
OQU81585	Sorghum	cytosol	51.29	49.38
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	51.13	41.14
TraesCS3A01G274400.1	Wheat	cytosol	53.86	36.69
TraesCS1A01G340100.1	Wheat	nucleus	53.22	36.06
TraesCS5A01G547300.1	Wheat	golgi, plastid	45.98	29.36
TraesCS4A01G232900.1	Wheat	cytosol	6.43	28.99
TraesCS6A01G195200.1	Wheat	plastid	42.44	28.82
TraesCS5A01G118900.1	Wheat	unclear	42.12	28.48
TraesCS2A01G287300.2	Wheat	plastid	40.84	28.38
TraesCS6A01G146400.1	Wheat	mitochondrion	44.69	28.05
TraesCS5A01G321300.1	Wheat	plastid	41.64	27.97
TraesCS4A01G232800.1	Wheat	plastid	42.12	27.93
TraesCS2A01G291100.1	Wheat	plastid	41.32	27.17

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS7A01G050400
EnsemblPlants:TraesCS7A01G050400.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7A:-:23521109..23523432

Molecular Weight (calculated)

68430.9 Da

IEP (calculated)

7.165

GRAVY (calculated)

-0.107

Length

622 amino acids

Sequence
(BLAST)

001: MEQAMLARVL AVTSVGLSWA VVWSLLSQQL KPFSTPAILR TLDAAASDPV IGRDDDIDRV ICILCRRSKN CAALVGPAGV GKTAIVEGLA RRIAAGTVPE
101: ALAGAHVAEL DVGAMVAGTH WRGMFEQRLK DAIKKAEDSA GKLILFMDEM HMIVGAGDQR GGTGDAANIL KPALARGRIR CIGATTTEEY RKYIQRDAAL
201: ERRFQRVDVD EPTVQATVAI LQGLKQRYQD YHGLIISDDA LVAAAQLAGR YITGRQFPDK AIDLMDEACT SVKLHQPKQI RDKKTSTINA VEEITVGPCH
301: IAQVVSRWTK IPITTLGREE EKFSHLVDRL HERVVGQHEA VNLVVQEVLR SRVGFDQSSQ PIGSFLFLGP TGVGKTELAK ALAEKLFDNE KMLVRFDMSG
401: YADSGSVSRL IGGPRSYEED GQLTDKVRSQ PYSVVLFDEA DKAHPSIFKV LIQLLDDGML IDGKGRSVYF KNTIIIMSSN LGAENLSAGM AEENMETARD
501: LLMEKVEKRF KPEFINKLSE TVIFEPLSHE ELREIVKIQM KSVVAMAANK GISLFASDAA LDVIWSESHD TVYGARPIKR WMKKNVTRVL VDMLVNGEAC
601: QGSTVFIDAA DDRKGLKYHV LK

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.