Factsheet for TraesCS4A01G324100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G324200.1	Wheat	cytosol	15.05	88.89
HORVU5Hr1G123460.3	Barley	mitochondrion	65.83	88.05
TraesCS5B01G554000.1	Wheat	cytosol	77.59	86.09
Os02t0537400-01	Rice	cytosol	47.18	68.72
TraesCS7A01G456700.1	Wheat	mitochondrion	50.16	67.65
TraesCS3A01G090400.1	Wheat	cytosol	53.13	65.44
TraesCS4A01G267200.1	Wheat	cytosol, plastid	65.36	62.15
TraesCS3A01G106800.1	Wheat	cytosol	61.6	62.09
TraesCS1A01G304800.1	Wheat	cytosol	64.73	60.82
TraesCS5A01G046800.1	Wheat	cytosol	46.55	60.61
KRH63249	Soybean	mitochondrion	18.34	60.31
TraesCS7A01G048300.1	Wheat	cytosol	56.11	59.47
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	57.68	59.16
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	57.52	59.0
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	57.21	58.68
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	54.86	58.53
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	58.15	58.52
TraesCS5A01G062800.1	Wheat	mitochondrion	63.64	58.5
TraesCS3A01G124200.1	Wheat	mitochondrion	52.51	58.26
OQU85081	Sorghum	mitochondrion, plastid	63.95	56.82
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	58.93	56.63
TraesCS7A01G048400.1	Wheat	cytosol	56.43	55.99
TraesCS7A01G050700.1	Wheat	extracellular	57.99	55.72
TraesCS4A01G443200.1	Wheat	cytosol	55.96	55.52
TraesCS4A01G443300.1	Wheat	plastid	55.8	55.37
OQU81585	Sorghum	cytosol	55.96	55.26
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	47.49	51.27
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	52.98	43.73
TraesCS3A01G274400.1	Wheat	cytosol	55.17	38.55
TraesCS1A01G340100.1	Wheat	nucleus	54.55	37.91
TraesCS5A01G118900.1	Wheat	unclear	42.95	29.78
TraesCS6A01G195200.1	Wheat	plastid	42.32	29.48
TraesCS5A01G547300.1	Wheat	golgi, plastid	44.36	29.06
TraesCS2A01G287300.2	Wheat	plastid	39.97	28.49
TraesCS2A01G291100.1	Wheat	plastid	41.22	27.8
TraesCS4A01G232800.1	Wheat	plastid	40.75	27.72
TraesCS6A01G146400.1	Wheat	mitochondrion	42.79	27.55
TraesCS5A01G321300.1	Wheat	plastid	39.97	27.54
TraesCS4A01G232900.1	Wheat	cytosol	5.33	24.64

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100
SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G324100	EnsemblPlants:TraesCS4A01G324100.1	TIGR:cd00009
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:611932162..611935806

Molecular Weight (calculated)

69654.1 Da

IEP (calculated)

7.135

GRAVY (calculated)

-0.182

Length

638 amino acids

Sequence
(BLAST)

001: MTATAGKSDP VVGRDDEIDR VVRILCRRTK NCAALVGAPG VGKTAIAEGL AQRVAAGKVP APLLGARVVE LEVAGMVSGT VWRMFEERMK DVIQQMEDSG
101: GKVILFIDEM HMLIGAGDWQ GRHDAANMLK SALARGRIRC VGATTLDEYS KHVEKDPALE RRFQKVHVDE PSEQATIGML RGLKKRFEEH HGIKIQDAAI
201: VAAAQLAGRY VTGRQFPDKA IDLIDEACTS TKGGQAFVSP EPLGNRDPFS GPRAAAAGPH RAATVVSRWT GIPVTSLSAE ETEKLIHLAD RLHERVVGQN
301: EAVNLVVQAV LRSRAGLDPP GQPIGSFLFL GSTGDGKTEL AKALPEQLFD NEKMLLRFDM SEYVHSGSVT CLIGAPPNYL GHQDGGQLTE KVRSRPYSVI
401: LFDEVEKADP SVLNVFLQLL DDGVLTDGKG RKVDFKNTVI IMTSNLGAEH LITGIRGENT MKGARDLLMK KVHEYFKPEL LNRLSQIVIF DPLSHEQLME
501: VVKMQMKSAT TRVAKKGISL SVSDAALHVI LSESYNPMYG ARPTRSWVQN NVMTVISEIL VKRQLAGSRI LIDAADNKKG LKYDVVKEEV VDAHVEAPVV
601: DDSQDKGDDL VLENPTVTTS HAPGLYRILY SRFGSILN

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.