Factsheet for TraesCS7A01G048300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	76.41	72.56
TraesCS5A01G046800.1	Wheat	cytosol	55.98	68.78
TraesCS7A01G048400.1	Wheat	cytosol	73.42	68.74
TraesCS4A01G443200.1	Wheat	cytosol	72.92	68.27
TraesCS4A01G443300.1	Wheat	plastid	72.59	67.96
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	74.25	67.32
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	69.44	67.2
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	69.27	67.04
TraesCS7A01G050700.1	Wheat	extracellular	73.92	67.02
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	69.1	66.88
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	65.45	65.89
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	62.62	63.79
TraesCS7A01G456700.1	Wheat	mitochondrion	49.5	63.0
TraesCS4A01G324200.1	Wheat	cytosol	11.13	62.04
TraesCS3A01G090400.1	Wheat	cytosol	52.16	60.62
Os02t0537400-01	Rice	cytosol	43.69	60.05
TraesCS3A01G124200.1	Wheat	mitochondrion	56.64	59.3
TraesCS3A01G106800.1	Wheat	cytosol	61.63	58.61
TraesCS4A01G267200.1	Wheat	cytosol, plastid	63.79	57.23
TraesCS1A01G304800.1	Wheat	cytosol	64.45	57.14
TraesCS5A01G062800.1	Wheat	mitochondrion	64.95	56.34
TraesCS4A01G324100.1	Wheat	cytosol	59.47	56.11
OQU85081	Sorghum	mitochondrion, plastid	60.8	50.97
KRH63249	Soybean	mitochondrion	16.11	50.0
OQU81585	Sorghum	cytosol	52.33	48.76
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	53.65	41.79
TraesCS3A01G274400.1	Wheat	cytosol	54.49	35.93
TraesCS1A01G340100.1	Wheat	nucleus	54.65	35.84
TraesCS4A01G232900.1	Wheat	cytosol	6.98	30.43
TraesCS5A01G547300.1	Wheat	golgi, plastid	47.51	29.36
TraesCS6A01G195200.1	Wheat	plastid	44.19	29.04
TraesCS5A01G118900.1	Wheat	unclear	43.69	28.59
TraesCS2A01G287300.2	Wheat	plastid	42.03	28.27
TraesCS6A01G146400.1	Wheat	mitochondrion	45.85	27.85
TraesCS4A01G232800.1	Wheat	plastid	43.19	27.72
TraesCS5A01G321300.1	Wheat	plastid	41.36	26.89
TraesCS2A01G291100.1	Wheat	plastid	40.03	25.48

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS7A01G048300
EnsemblPlants:TraesCS7A01G048300.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7A:+:22626215..22628495

Molecular Weight (calculated)

65936.0 Da

IEP (calculated)

8.090

GRAVY (calculated)

-0.147

Length

602 amino acids

Sequence
(BLAST)

001: MNGGETSHGA LRTLDAAAAD PVIGRDDEID RVICILIRRT KNCAALVGPA GVGKTAIIEG LAQRIAAGNV PDTLAGARIV EVDMGAMVAG TNWSGMFEQR
101: LKDAIKQAEE SDGKVILFID AMHMIVGAGA GERHPTVDAA NMLKPAMARG RVRCVGATTN EEYKPIQKDA ALERRFQKVV VEEPSLQATI AILQGLKQRY
201: QEHHGVKIQD DALVAAAQLA ARYITGRQFP DKAIDLIDEA CATRKMHVDK QKNAKNKQNN TIINTSEDMI VGPGHVAQVV SRWTKISLAT LHQGEKEKLI
301: NLAKKLHERV VGQDEAVNSV AKAVLRSRVG FGQSEQLINS FLFLGFLGVG KTELAKALAV KIFDTQKALI RFDMSEYAES GSVSRLIGGP RRFISYEEDG
401: QLTEKVKSCP YSVVLFDQVH KAEPSVFKLF IQILDDGMLT DGKGRLVNFK NTIIIMTTNL GANHLTSRIT GESTMRAGRD LLTKEIEKCF KPELMNRLSE
501: IVTFEPLSHD ELREVVKIQM KNVTAMVANK GVSLITTDAA LDVIWSEAHD PVYGARPIKR WVQKHVTAIL SDMMVNGEAC EGSTISIDAT EDKMGLKYQV
601: LN

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.