Factsheet for TraesCS7A01G050600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, secretory
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G050700.1	Wheat	extracellular	95.6	85.09
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	93.57	83.28
HORVU7Hr1G008940.2	Barley	cytosol	83.93	78.11
HORVU7Hr1G035110.4	Barley	cytosol	56.85	76.36
HORVU7Hr1G009000.2	Barley	cytosol	44.16	74.15
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	67.51	62.93
TraesCS7A01G048300.1	Wheat	cytosol	63.79	62.62
TraesCS4A01G443200.1	Wheat	cytosol	66.33	60.96
TraesCS4A01G443300.1	Wheat	plastid	66.16	60.81
TraesCS7A01G048400.1	Wheat	cytosol	65.48	60.19
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	63.11	59.97
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	62.77	59.65
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	62.1	59.0
TraesCS5A01G046800.1	Wheat	cytosol	48.39	58.37
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	58.38	57.69
TraesCS7A01G456700.1	Wheat	mitochondrion	42.64	53.28
TraesCS4A01G324200.1	Wheat	cytosol	9.64	52.78
TraesCS4A01G267200.1	Wheat	cytosol, plastid	57.19	50.37
Os02t0537400-01	Rice	cytosol	37.23	50.23
TraesCS3A01G090400.1	Wheat	cytosol	43.65	49.81
TraesCS3A01G106800.1	Wheat	cytosol	53.3	49.76
TraesCS3A01G124200.1	Wheat	mitochondrion	47.88	49.22
TraesCS1A01G304800.1	Wheat	cytosol	56.01	48.75
TraesCS5A01G062800.1	Wheat	mitochondrion	57.02	48.56
TraesCS4A01G324100.1	Wheat	cytosol	51.27	47.49
OQU85081	Sorghum	mitochondrion, plastid	51.61	42.48
OQU81585	Sorghum	cytosol	46.19	42.26
KRH63249	Soybean	mitochondrion	12.69	38.66
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	46.87	35.83
TraesCS3A01G274400.1	Wheat	cytosol	48.9	31.65
TraesCS1A01G340100.1	Wheat	nucleus	47.88	30.83
TraesCS4A01G232900.1	Wheat	cytosol	6.26	26.81
TraesCS2A01G287300.2	Wheat	plastid	37.06	24.47
TraesCS6A01G195200.1	Wheat	plastid	37.56	24.24
TraesCS5A01G118900.1	Wheat	unclear	37.23	23.91
TraesCS5A01G547300.1	Wheat	golgi, plastid	38.75	23.51
TraesCS6A01G146400.1	Wheat	mitochondrion	38.75	23.11
TraesCS4A01G232800.1	Wheat	plastid	36.55	23.03
TraesCS5A01G321300.1	Wheat	plastid	36.04	23.0
TraesCS2A01G291100.1	Wheat	plastid	35.19	21.99

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382
SMART:SM01086	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G050600	EnsemblPlants:TraesCS7A01G050600.1	TIGR:cd00009
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:23786891..23789436

Molecular Weight (calculated)

64720.1 Da

IEP (calculated)

6.881

GRAVY (calculated)

-0.073

Length

591 amino acids

Sequence
(BLAST)

001: MSSWSGLAFV VASAVTGSAV TLAASAFYDL YFQRSYAFDI MPPDLSPSSR YIYTRAQNND KAERAITTCS VLSALDAGRA DPVIGRDDEI DRVICILCRR
101: TKNCAALVGA AGVGKTAIVE GLAQRIAAGN VPDMLARACI LELDMGAVVA GTCWRGMFEE RLKDAIKHAE EAGGKEAPLS NILKLALARG RIRCVGATTC
201: EEYHRYIQTD AALECRFQKV VVEESSVQGT ITILKGLKQR YQEHHGLKIQ DDALVAAAQL AACYITGRQF PDKAIDLIDE ACSTAKVHFD KQKVENNIIS
301: SIFAPKELTV GPDHIAQVVS RCTRIRLTTL GQEEKEKVGF GQSSRPIGSF LFLGPLGVGK TELAKALAER IFDNEKMLIR FDMSEYAESG SLSRLIGGPR
401: SYEEDGQLTE KVKRSPYSVV LFDHVDKADP SIFKVFIQLL DDGAEHLTTR MGIENTVKAG RGLLMGQVLK RLKPELIDRL SEVVIFEPLS HDELKEILKI
501: QMKDVIATVA NKGVTLFITD AAQDVILSES YHLVSGARPM RRWVEKNVTT VLSNMLVNGE ACEGSTLSID AADLNRGLRY HVLKKQGSTD P

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.