Factsheet for TraesCS4A01G232800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G081100.1	Wheat	plastid	98.4	98.19
TraesCS4B01G083000.1	Wheat	plastid	98.4	98.19
HORVU4Hr1G014120.2	Barley	plastid	95.84	95.84
Os11t0267400-01	Rice	plasma membrane	73.99	74.46
TraesCS2A01G287300.2	Wheat	plastid	70.15	73.52
TraesCS5A01G118900.1	Wheat	unclear	71.64	73.04
TraesCS6A01G195200.1	Wheat	plastid	71.0	72.71
Os11t0269000-00	Rice	cytosol, plasma membrane	25.69	61.17
TraesCS4A01G232900.1	Wheat	cytosol	8.96	60.87
EES13207	Sorghum	cytosol	27.08	60.62
OQU79828	Sorghum	plastid	47.55	57.62
TraesCS7A01G048300.1	Wheat	cytosol	27.72	43.19
TraesCS4A01G267200.1	Wheat	cytosol, plastid	30.81	43.07
TraesCS7A01G456700.1	Wheat	mitochondrion	21.64	42.92
TraesCS3A01G090400.1	Wheat	cytosol	23.67	42.86
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	28.25	42.6
TraesCS3A01G106800.1	Wheat	cytosol	28.57	42.34
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	27.93	42.12
TraesCS5A01G321300.1	Wheat	plastid	41.47	42.01
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	27.83	41.96
TraesCS1A01G304800.1	Wheat	cytosol	30.06	41.53
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	27.83	41.17
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	26.23	41.14
TraesCS2A01G291100.1	Wheat	plastid	41.26	40.91
TraesCS3A01G124200.1	Wheat	mitochondrion	25.05	40.87
TraesCS5A01G046800.1	Wheat	cytosol	21.32	40.82
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	28.89	40.81
TraesCS4A01G324100.1	Wheat	cytosol	27.72	40.75
TraesCS5A01G062800.1	Wheat	mitochondrion	29.74	40.2
TraesCS7A01G050700.1	Wheat	extracellular	28.36	40.06
TraesCS7A01G048400.1	Wheat	cytosol	27.08	39.5
TraesCS4A01G443200.1	Wheat	cytosol	26.65	38.88
TraesCS4A01G443300.1	Wheat	plastid	26.55	38.72
TraesCS6A01G146400.1	Wheat	mitochondrion	40.83	38.65
TraesCS5A01G547300.1	Wheat	golgi, plastid	39.66	38.19
TraesCS1A01G340100.1	Wheat	nucleus	37.1	37.91
TraesCS3A01G274400.1	Wheat	cytosol	36.78	37.79
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	30.7	37.26
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	23.03	36.55
TraesCS4A01G324200.1	Wheat	cytosol	4.05	35.19

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:19.4.2.9.4	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0008150	GO:GO:0008152	GO:GO:0019538	InterPro:IPR001943	InterPro:IPR036628	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF02151	PFAM:PF02861	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300
ScanProsite:PS00870	ScanProsite:PS00871	PFscan:PS50151	PANTHER:PTHR43572	PANTHER:PTHR43572:SF8	SMART:SM00382
SMART:SM01086	SUPFAM:SSF52540	SUPFAM:SSF81923	EnsemblPlantsGene:TraesCS4A01G232800	EnsemblPlants:TraesCS4A01G232800.1	InterPro:UVR_dom
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:542033451..542038903

Molecular Weight (calculated)

102747.0 Da

IEP (calculated)

6.641

GRAVY (calculated)

-0.306

Length

938 amino acids

Sequence
(BLAST)

001: MESTLLRPPA LGLGSPAGLG GGTAGWRSRS ATRPPSVVPA LPRPARWRPV KMSALAGHRR DFHTPPVTLT PASVFSVGGG FGPSSSSSRG SSSRGRRRLV
101: ARAMFESFTE KAIRVIMLAQ EESRRLGHHT VGSEQILLGL VGEGTGIAAK VLRSAGLNLK DARAEVEKVL GRGPGLIPIE IPFTASAKKV IESSTEESRQ
201: LGHNYIGTEH LLLGLIREDD GAAAIVLKNF QADLGDIRNE VIKMITDMSE DQTVGASVGG GSSGAKMPTL EEYGTNLTKL AQEGKLDPVV GRNKQIERVL
301: QILGRRTKNN PCLIGEPGVG KTAIAEGLAQ RIATGDVPET VEGKTVITLD MGLLVAGTKY RGEFEERLKK LMEEIKQNGD IILFLDEVHT LVGAGAAEGA
401: IDAANILKPA LARGELQCLG ATTIDEYRKH IEKDPALERR FQPVKVPEPT VDETIGILKG LRERYEIHHK LRYSDEALIA AAQLSYQYIS DRFLPDKAID
501: LVDEAGSLVR LRHAKLPDEA KDLDKKLKEI TRQKNDAIRS QEFETAGELR REELELKTQI MSLVDKSKEV SKAEMESGAS AGPMVTEADI QRIVASWTSV
601: PVEKVSVDES SRLLKMEETL HGRVIGQDEA VRAIGRAIRR ARVGLRNPNR PVASFIFAGP TGVGKSELAK ALATSYYGSE EAMVRLDMSE FMERHTVAKL
701: IGSPPGYVGY TEGGQLTEAV RRRPYTVVLL DEIEKAHPDV FNLMLQIMED GRLTDSRGRT VDFKNTLIIM TSNVGSSVIE KGGKQLGFDH DDGEARSSYG
801: RIKSLVDEEM KQYFRPEFLN RLDEMVVFRQ LTKMEVKEIA IIMLAEVTGR MKAKGIELMV TENFKDLVVE EGYDPSYGAR PLRRAIMRLL EDKLADKMLA
901: EDVKEGDYVI IDADPMGNVA VLSRHSDSPE DQPLAFPA

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.