Factsheet for TraesCS4A01G443300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G443200.1	Wheat	cytosol	99.22	99.22
TraesCSU01G211500.1	Wheat	cytosol	94.4	94.4
TraesCSU01G064000.1	Wheat	plastid	94.4	94.4
TraesCS7D01G042800.1	Wheat	plastid	94.09	94.09
TraesCS7A01G048400.1	Wheat	cytosol	91.29	91.29
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	85.07	86.28
HORVU7Hr1G008380.2	Barley	cytosol	34.84	76.71
TraesCS7A01G048300.1	Wheat	cytosol	67.96	72.59
TraesCS7A01G050700.1	Wheat	extracellular	72.01	69.73
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	72.01	69.73
TraesCS5A01G046800.1	Wheat	cytosol	51.32	67.35
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	64.7	66.88
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	64.54	66.72
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	64.23	66.4
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	60.81	66.16
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	60.96	65.55
TraesCS7A01G456700.1	Wheat	mitochondrion	44.48	60.47
TraesCS4A01G324200.1	Wheat	cytosol	9.95	59.26
Os02t0537400-01	Rice	cytosol	40.28	59.13
TraesCS3A01G090400.1	Wheat	cytosol	47.59	59.07
TraesCS3A01G124200.1	Wheat	mitochondrion	52.72	58.96
TraesCS3A01G106800.1	Wheat	cytosol	57.7	58.61
TraesCS4A01G267200.1	Wheat	cytosol, plastid	59.56	57.08
TraesCS1A01G304800.1	Wheat	cytosol	59.1	55.96
TraesCS4A01G324100.1	Wheat	cytosol	55.37	55.8
TraesCS5A01G062800.1	Wheat	mitochondrion	60.19	55.76
OQU85081	Sorghum	mitochondrion, plastid	56.77	50.84
KRH63249	Soybean	mitochondrion	14.62	48.45
OQU81585	Sorghum	cytosol	48.37	48.14
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	50.08	41.66
TraesCS3A01G274400.1	Wheat	cytosol	52.1	36.69
TraesCS1A01G340100.1	Wheat	nucleus	51.32	35.95
TraesCS5A01G547300.1	Wheat	golgi, plastid	42.61	28.13
TraesCS6A01G195200.1	Wheat	plastid	39.81	27.95
TraesCS5A01G118900.1	Wheat	unclear	39.66	27.72
TraesCS6A01G146400.1	Wheat	mitochondrion	42.61	27.65
TraesCS2A01G287300.2	Wheat	plastid	37.95	27.26
TraesCS4A01G232900.1	Wheat	cytosol	5.75	26.81
TraesCS5A01G321300.1	Wheat	plastid	38.41	26.67
TraesCS4A01G232800.1	Wheat	plastid	38.72	26.55
TraesCS2A01G291100.1	Wheat	plastid	38.72	26.32

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:Clp_ATPase_C	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	PANTHER:PTHR11638
PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G443300	EnsemblPlants:TraesCS4A01G443300.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:711839832..711842701

Molecular Weight (calculated)

70514.2 Da

IEP (calculated)

7.100

GRAVY (calculated)

-0.103

Length

643 amino acids

Sequence
(BLAST)

001: MSWSSPESML FVGASAVASA ALTWATWTLL DEFKYDKRPS YTNYNELLGV KPLDATASLR TLDAATTDTV IGRNDEIDHL VCILCRRTKN CAALVGAAGV
101: GKTAIVEGLA QRIAAGNVPN TLVGARIVEV DMGAMMAGTH WRGMFEQRIK DAIKEAEEAE GKVILFIDEM HMVVGAGEHK GGPIDAPNIL KPALARGRIR
201: CVGATTSEEY QKYVHTDAAL ERRFQKVVIE EPTVHATIAI LQGLKHRYQE HHGLKIQDDA LVAAAHLAAR YITGRKFPDK AIDLMDEACA TTKMHADKQT
301: TLEIVVGPGH VARVVSRWTK IPLTTLDQEE NEKLIHIAKK LHEHVIGQDE AVNLVAQAVL RSRLGFGQIG QPISAFLFLG PIGVGKTELA KALAEKIFDN
401: EKALIHFDMS EYADSGFVSR LTGGSRSYEE YGQLTEKVKR LPYSVILFDQ VDKANASVFK VFHQLLDDAM LTDGKGQVVD FKNTIVIMTS NIGAEHLPSR
501: ITGENTIKSG RDLLMNQVKK RFKPELINRL SKVVIFEPLS HNELRKIVKI QMNNVIATVA NKGVSVLATD AALDVILSQS HDPVDGARPI RRWVQNHVST
601: ILSDMLVDGE ACAGSTISID AAADDKRGLT FQVLKKQQEL ADQ

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.