Factsheet for TraesCS4A01G226000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G090300.1	Wheat	mitochondrion	90.94	90.48
Os02t0297132-00	Rice	cytosol	36.09	74.01
KRH63249	Soybean	mitochondrion	14.36	57.22
TraesCS7A01G456700.1	Wheat	mitochondrion	34.67	56.66
TraesCS3A01G106800.1	Wheat	cytosol	44.63	54.5
TraesCS3A01G090400.1	Wheat	cytosol	35.96	53.67
TraesCS7A01G048300.1	Wheat	cytosol	41.79	53.65
TraesCS4A01G267200.1	Wheat	cytosol, plastid	46.57	53.65
TraesCS1A01G304800.1	Wheat	cytosol	46.57	53.02
TraesCS4A01G324100.1	Wheat	cytosol	43.73	52.98
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	42.82	52.21
TraesCS5A01G046800.1	Wheat	cytosol	32.86	51.84
TraesCS3A01G124200.1	Wheat	mitochondrion	38.55	51.83
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	41.27	51.29
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	41.14	51.13
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	43.86	51.05
TraesCS5A01G062800.1	Wheat	mitochondrion	45.67	50.86
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	40.88	50.8
TraesCS7A01G048400.1	Wheat	cytosol	42.17	50.7
TraesCS7A01G050700.1	Wheat	extracellular	43.47	50.6
TraesCS4A01G443200.1	Wheat	cytosol	41.91	50.39
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	38.94	50.33
TraesCS4A01G443300.1	Wheat	plastid	41.66	50.08
TraesCS4A01G324200.1	Wheat	cytosol	6.6	47.22
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	35.83	46.87
TraesCS3A01G274400.1	Wheat	cytosol	50.06	42.39
TraesCS1A01G340100.1	Wheat	nucleus	49.42	41.61
TraesCS5A01G547300.1	Wheat	golgi, plastid	42.56	33.78
TraesCS5A01G118900.1	Wheat	unclear	38.29	32.17
TraesCS6A01G195200.1	Wheat	plastid	38.03	32.1
TraesCS6A01G146400.1	Wheat	mitochondrion	40.62	31.69
TraesCS2A01G287300.2	Wheat	plastid	35.96	31.06
TraesCS5A01G321300.1	Wheat	plastid	36.87	30.78
TraesCS4A01G232800.1	Wheat	plastid	37.26	30.7
TraesCS2A01G291100.1	Wheat	plastid	37.13	30.34
TraesCS4A01G232900.1	Wheat	cytosol	5.05	28.26

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G226000
EnsemblPlants:TraesCS4A01G226000.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:534167672..534170275

Molecular Weight (calculated)

83381.6 Da

IEP (calculated)

9.027

GRAVY (calculated)

-0.355

Length

773 amino acids

Sequence
(BLAST)

001: MCKCKPERRT TVSHIHTAPL QISRARSMAR GSSAGGNKAG GTKASIQIDW TATFEGSPSS TIAGGDGSAK KDPKTPTSGD PSSNNAQPPK SAATPPAEGN
101: SSSKPPRPAK GNSRGGGRAK KEAPVAPPPC PSTAIFGDKT NLDTFGCDLT AAAANADPVV GREDEIDRVV CILSRKSKNS AVLVGAAGVG KTAIAEGLAQ
201: RIARGEVSGV LAGARVVEIN VAAMVSGTRA RGTFEERFTG LIAEVEAAVA GKVVLFIDEI HTLLGAGRFS GCMDAANMLK PALARGRVRC LGATTHAEYH
301: HYFLQDKALE RRFQKVHVSE PSEDETVAIL RRLKAAYEEH HGMEIQDEAL VAAAKLSGRY IPARHFPDKA IDLVDEACAT ARLVMDRRKK QATGDGDKPL
401: APKDENVGLD HIAQIVSKWT GIPVTSLGTD ERKRLLELPK RLHWRVIDQD EAVNVVAEAV VRSRSGLGEP NQPSGSFLFL GPTGVGKTEL AKALAEQLFG
501: NEKLLVRIDM SEYMGSSSVT RLIGASPGSY GYEKGGQLTE LVRQRPYSVV LLDEVEKADA AVLNVFLQIL DDGRVTDGHG RTINFTNTII IMTSNLGAHH
601: LLARAATKDM EATRKRVIAD VRRHFRPELI NRLSEMVIFR PLSGEQLRRV ARMQLKGIAA RLAEKGIGLD VTDAALDVIL SRSTDQVQMY GARPIKRCLQ
701: KNVMTRISKM VVREEVNDDC YVSVDADEEK KDLVFAVDKQ SSNENDDPSS SSTKKRKRPP AKHLVVIDDD EDE

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.