Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G226000.1 | Wheat | mitochondrion, plastid | 90.48 | 90.94 |
| Os02t0297132-00 | Rice | cytosol | 35.52 | 73.21 |
| KRH63249 | Soybean | mitochondrion | 14.8 | 59.28 |
| TraesCS5B01G554000.1 | Wheat | cytosol | 41.96 | 56.7 |
| TraesCS7B01G357500.1 | Wheat | cytosol | 46.2 | 54.89 |
| TraesCS7B01G357600.2 | Wheat | cytosol | 46.72 | 53.86 |
| TraesCS5B01G422900.1 | Wheat | cytosol | 42.6 | 53.22 |
| TraesCS4B01G046000.1 | Wheat | cytosol | 44.92 | 52.64 |
| TraesCS5B01G422800.1 | Wheat | cytosol | 44.92 | 52.17 |
| TraesCS5B01G537100.1 | Wheat | mitochondrion | 45.05 | 51.85 |
| TraesCS7B01G357400.1 | Wheat | cytosol | 44.14 | 51.42 |
| TraesCS1B01G315600.1 | Wheat | cytosol | 46.85 | 49.59 |
| TraesCS5B01G423000.1 | Wheat | cytosol | 43.89 | 49.49 |
| TraesCS2B01G158300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 43.89 | 49.42 |
| TraesCS5B01G070000.1 | Wheat | mitochondrion | 28.31 | 46.41 |
| TraesCS6B01G278000.1 | Wheat | cytosol | 46.2 | 43.73 |
| TraesCS3B01G308100.1 | Wheat | cytosol | 48.39 | 41.18 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 48.01 | 40.68 |
| TraesCS4B01G393100.1 | Wheat | cytosol | 44.92 | 38.65 |
| TraesCS4B01G082900.1 | Wheat | mitochondrion | 34.11 | 35.19 |
| TraesCS4B01G380800.1 | Wheat | plastid | 42.6 | 33.95 |
| TraesCS5B01G112500.1 | Wheat | plastid | 37.07 | 31.3 |
| TraesCS6B01G174500.1 | Wheat | mitochondrion | 39.77 | 31.18 |
| TraesCS6B01G233800.1 | Wheat | plastid | 36.68 | 31.11 |
| TraesCS2B01G304200.1 | Wheat | golgi | 36.55 | 30.97 |
| TraesCS5B01G321800.1 | Wheat | plastid | 36.04 | 30.2 |
| TraesCS4B01G083000.1 | Wheat | plastid | 35.91 | 29.68 |
| TraesCS2B01G307500.1 | Wheat | plastid | 35.78 | 29.45 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:ClpA/B |
| InterPro:Clp_ATPase_C | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 |
| SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4B01G090300 | EnsemblPlants:TraesCS4B01G090300.1 | TIGR:cd00009 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:92533538..92536179
Molecular Weight (calculated)
83710.8 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.371
Length
777 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNVRTQTNY HGITHSHRIF TDSRRSMARG SAAGGNKAGG AKPSIEIDWT ATFEGSPSST IAGGDGSAKK DPKTPTSGDP SSNNAQPPKS AATPPAEGNS
101: STKPPRPAKG NSRQPARGGG RAKKEAPAAP PPCPLTASFG GKTNLDTFGC DLTAAAANAD PVVGREDEID RVVCILSRKS KNSAVLVGAA GVGKTAIAEG
201: LAQRIARGEV SGVLAGARVL EINVAAMISG TRARGTFEER LTGLIAEVEA AAAGKVVLFI DEIHTLLGAG LFSGCMDASN MLKPALARSR VRCLGATTHA
301: EYHHYFLQDK ALERRFQKVH VSEPSEEETV AILRRLKAAY EEHHGMEIQD EALVVAAKLS GRYIPARHFP DKAIDLVDEA CATARLVMDR RKKQATGNDD
401: KPLAPKDENV GPDHIAQIVS KWTGIPVTSL GTDERKRLLE LPKRLHRRVI DQDEAVNVVA EAVVRSRSGL GEPNQPSGSF LFLGPTGVGK TELAKALAEQ
501: LFGNEKLLVR IDMSEYMSSS SVTRLIGASP GSHLYEKGGQ LTELVRQRPY SVVLLDEVEK AGASVLNVFL QILDDGRVTD GQGRAVDFTN TIIIMTSNLG
601: AHHLLARAAS KDTEATRKRV IADVQRHFGP ELVNRLSEMV IFRPLSREQL LRVARMQLKG IAARLAEKGI GLDITDAALD VILSRSSDQV QMYGARPVKR
701: CLQKNVMTRI SKMVVQEEVD DDCYVSVDAD EEKKDLVFAV DKQSSKENDD PSSSSTKKRK RPPVKHLVVI DEDEEDE
101: STKPPRPAKG NSRQPARGGG RAKKEAPAAP PPCPLTASFG GKTNLDTFGC DLTAAAANAD PVVGREDEID RVVCILSRKS KNSAVLVGAA GVGKTAIAEG
201: LAQRIARGEV SGVLAGARVL EINVAAMISG TRARGTFEER LTGLIAEVEA AAAGKVVLFI DEIHTLLGAG LFSGCMDASN MLKPALARSR VRCLGATTHA
301: EYHHYFLQDK ALERRFQKVH VSEPSEEETV AILRRLKAAY EEHHGMEIQD EALVVAAKLS GRYIPARHFP DKAIDLVDEA CATARLVMDR RKKQATGNDD
401: KPLAPKDENV GPDHIAQIVS KWTGIPVTSL GTDERKRLLE LPKRLHRRVI DQDEAVNVVA EAVVRSRSGL GEPNQPSGSF LFLGPTGVGK TELAKALAEQ
501: LFGNEKLLVR IDMSEYMSSS SVTRLIGASP GSHLYEKGGQ LTELVRQRPY SVVLLDEVEK AGASVLNVFL QILDDGRVTD GQGRAVDFTN TIIIMTSNLG
601: AHHLLARAAS KDTEATRKRV IADVQRHFGP ELVNRLSEMV IFRPLSREQL LRVARMQLKG IAARLAEKGI GLDITDAALD VILSRSSDQV QMYGARPVKR
701: CLQKNVMTRI SKMVVQEEVD DDCYVSVDAD EEKKDLVFAV DKQSSKENDD PSSSSTKKRK RPPVKHLVVI DEDEEDE
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.