Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G554000.1 | Wheat | cytosol | 63.26 | 74.26 |
| TraesCS3A01G106800.1 | Wheat | cytosol | 64.44 | 68.72 |
| TraesCS5B01G422900.1 | Wheat | cytosol | 62.96 | 68.33 |
| TraesCS7B01G357500.1 | Wheat | cytosol | 63.7 | 65.75 |
| TraesCS5B01G422800.1 | Wheat | cytosol | 64.89 | 65.47 |
| TraesCS4B01G046000.1 | Wheat | cytosol | 63.26 | 64.4 |
| TraesCS7B01G357600.2 | Wheat | cytosol | 64.3 | 64.39 |
| TraesCS7B01G357400.1 | Wheat | cytosol | 62.07 | 62.82 |
| TraesCS5B01G423000.1 | Wheat | cytosol | 63.41 | 62.12 |
| TraesCS2B01G158300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 62.67 | 61.3 |
| TraesCS1B01G315600.1 | Wheat | cytosol | 64.0 | 58.86 |
| KRH63249 | Soybean | mitochondrion | 16.89 | 58.76 |
| TraesCS5B01G070000.1 | Wheat | mitochondrion | 40.0 | 56.96 |
| OQU85081 | Sorghum | mitochondrion, plastid | 60.15 | 56.55 |
| OQU81585 | Sorghum | cytosol | 53.63 | 56.04 |
| TraesCS6B01G278000.1 | Wheat | cytosol | 62.96 | 51.77 |
| TraesCS4B01G090300.1 | Wheat | mitochondrion | 51.85 | 45.05 |
| TraesCS3B01G308100.1 | Wheat | cytosol | 54.07 | 39.98 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 53.48 | 39.37 |
| TraesCS4B01G393100.1 | Wheat | cytosol | 51.11 | 38.21 |
| TraesCS4B01G082900.1 | Wheat | mitochondrion | 41.78 | 37.45 |
| TraesCS6B01G233800.1 | Wheat | plastid | 43.11 | 31.77 |
| TraesCS5B01G112500.1 | Wheat | plastid | 43.11 | 31.63 |
| TraesCS2B01G304200.1 | Wheat | golgi | 42.96 | 31.62 |
| TraesCS4B01G380800.1 | Wheat | plastid | 45.33 | 31.38 |
| TraesCS6B01G174500.1 | Wheat | mitochondrion | 45.04 | 30.68 |
| TraesCS4B01G083000.1 | Wheat | plastid | 41.04 | 29.47 |
| TraesCS5B01G321800.1 | Wheat | plastid | 40.15 | 29.23 |
| TraesCS2B01G307500.1 | Wheat | plastid | 40.3 | 28.81 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:ClpA/B |
| InterPro:ClpA/B_CS1 | InterPro:Clp_ATPase_C | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 |
| PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS5B01G537100 |
| EnsemblPlants:TraesCS5B01G537100.1 | TIGR:cd00009 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:-:693021158..693035056
Molecular Weight (calculated)
75026.9 Da
IEP (calculated)
8.001
GRAVY (calculated)
-0.157
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MACVGATAAV CYGAWRYYRY KTCLRTYGRD LTALASKQRD PVVPVHRDDK VDPVPVVRRD DERNSGHNAA YYRDMSHKAV TAGEADPVVG RDDEIDRVVR
101: ILCRRTKNCA ALVGAAGVGK TAVAEGLAQR IAEGKVPKQL AGARLVELDL AAMVAGTRWR GMFEERMKNV ISSAEASNGK IILFIDEMHT LVGAGDYQRR
201: NDAANMLKPA LARGRIRCVG ATTFDEYRKH IEKDPALERR FQKVHVDEPS EQATIGILRG LKQRYEEHHG LQIQDAAIVA AAQLAGRYVT GRQFPDKGID
301: LIDEACTSSL EGSEMIVGPD HIAQVAILLK IHIYVYYFNR YMHVVSRWTG IPIATLDQDE KVKLVHLAHR LHERVVGQYE AVNLVADTVL CSRAGLDHPG
401: QPIGSFLFVG LTGVGKTELA KALAEQLFDE EKMLIRFDMS EYVSPGSVLR LVGAPPSYLG YEEGGQLTEK VRRRPYSVIL FDEVEKAHHS VLNVLLQLLD
501: DGVVTDGKGR NVDFKNTVII MTSNVGAQHI TPGIAGENTL RTARDLLMKQ VRKYFKPELL NRLSEIVIFE PLSHHQLKEI VNIQMKEIIV RVASKGISLV
601: LKDAALDVIL SESYNLMYGA RPIKRWVEKN IITIICQMLV NGEADEDSII TIDAAMDKKG LKYQVAKNET AADLV
101: ILCRRTKNCA ALVGAAGVGK TAVAEGLAQR IAEGKVPKQL AGARLVELDL AAMVAGTRWR GMFEERMKNV ISSAEASNGK IILFIDEMHT LVGAGDYQRR
201: NDAANMLKPA LARGRIRCVG ATTFDEYRKH IEKDPALERR FQKVHVDEPS EQATIGILRG LKQRYEEHHG LQIQDAAIVA AAQLAGRYVT GRQFPDKGID
301: LIDEACTSSL EGSEMIVGPD HIAQVAILLK IHIYVYYFNR YMHVVSRWTG IPIATLDQDE KVKLVHLAHR LHERVVGQYE AVNLVADTVL CSRAGLDHPG
401: QPIGSFLFVG LTGVGKTELA KALAEQLFDE EKMLIRFDMS EYVSPGSVLR LVGAPPSYLG YEEGGQLTEK VRRRPYSVIL FDEVEKAHHS VLNVLLQLLD
501: DGVVTDGKGR NVDFKNTVII MTSNVGAQHI TPGIAGENTL RTARDLLMKQ VRKYFKPELL NRLSEIVIFE PLSHHQLKEI VNIQMKEIIV RVASKGISLV
601: LKDAALDVIL SESYNLMYGA RPIKRWVEKN IITIICQMLV NGEADEDSII TIDAAMDKKG LKYQVAKNET AADLV
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.