CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0297132-00	Rice	cytosol	58.25	29.97
TraesCS3D01G449000.1	Wheat	cytosol	41.75	29.14
HORVU7Hr1G009000.2	Barley	cytosol	52.06	28.69
Os02t0537400-01	Rice	cytosol	60.82	26.94
TraesCS7A01G456700.1	Wheat	mitochondrion	58.76	24.1
TraesCS5B01G070000.1	Wheat	mitochondrion	57.22	23.42
HORVU5Hr1G123460.3	Barley	mitochondrion	57.22	23.27
HORVU7Hr1G035110.4	Barley	cytosol	51.55	22.73
TraesCS2D01G136900.1	Wheat	cytosol	58.76	21.84
TraesCS3A01G090400.1	Wheat	cytosol	57.22	21.43
KRH54672	Soybean	endoplasmic reticulum	82.99	21.38
TraesCS7D01G445400.1	Wheat	cytosol	59.28	20.25
TraesCS5B01G554000.1	Wheat	cytosol	59.28	20.0
HORVU7Hr1G105430.1	Barley	cytosol	57.73	19.96
TraesCS3D01G090400.1	Wheat	mitochondrion	59.79	19.53
TraesCS5A01G046800.1	Wheat	cytosol	47.94	18.98
TraesCS4A01G324100.1	Wheat	cytosol	60.31	18.34
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	49.48	18.25
TraesCS5B01G422900.1	Wheat	cytosol	58.25	18.17
TraesCS7D01G045400.1	Wheat	cytosol	45.88	18.05
KRH56831	Soybean	endoplasmic reticulum	84.54	18.0
TraesCS7B01G357500.1	Wheat	cytosol	59.79	17.74
TraesCS4A01G324200.1	Wheat	cytosol	9.79	17.59
TraesCS7B01G357600.2	Wheat	cytosol	60.82	17.51
TraesCS7D01G046200.1	Wheat	cytosol	46.91	17.43
HORVU7Hr1G105530.1	Barley	cytosol	58.76	17.35
OQU81585	Sorghum	cytosol	57.73	17.34
HORVU5Hr1G102440.2	Barley	mitochondrion, plastid	59.28	17.22
TraesCS2B01G158300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	60.82	17.1
TraesCS3A01G106800.1	Wheat	cytosol	55.67	17.06
TraesCS4D01G046000.1	Wheat	cytosol	58.25	17.04
TraesCS4B01G046000.1	Wheat	cytosol	58.25	17.04
TraesCS5D01G429500.1	Wheat	cytosol	58.76	17.04
TraesCS5B01G422800.1	Wheat	cytosol	58.76	17.04
TraesCS7B01G357400.1	Wheat	cytosol	58.25	16.94
TraesCS5B01G537100.1	Wheat	mitochondrion	58.76	16.89
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	57.73	16.79
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	51.55	16.72
TraesCS4A01G267200.1	Wheat	cytosol, plastid	57.73	16.69
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	53.09	16.56
TraesCSU01G102300.1	Wheat	endoplasmic reticulum	53.09	16.56
TraesCSU01G102400.1	Wheat	endoplasmic reticulum	53.09	16.56
TraesCS1A01G304800.1	Wheat	cytosol	57.73	16.49
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	52.58	16.4
HORVU7Hr1G105270.3	Barley	cytosol	60.31	16.39
TraesCS4D01G047000.1	Wheat	cytosol	56.19	16.34
KRH52355	Soybean	cytosol, mitochondrion	54.64	16.28
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	57.73	16.28
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	52.06	16.24
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	52.06	16.24
TraesCS5D01G429600.1	Wheat	mitochondrion	57.22	16.13
TraesCS7A01G048300.1	Wheat	cytosol	50.0	16.11
TraesCS5D01G074000.1	Wheat	mitochondrion	57.22	16.02
OQU85081	Sorghum	mitochondrion, plastid	59.28	16.02
TraesCS5A01G062800.1	Wheat	mitochondrion	57.22	15.99
TraesCS5B01G423000.1	Wheat	cytosol	56.7	15.97
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	51.03	15.92
HORVU7Hr1G008940.2	Barley	cytosol	52.06	15.91
HORVU1Hr1G068970.1	Barley	cytosol	57.73	15.53
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	50.52	15.46
TraesCS1B01G315600.1	Wheat	cytosol	58.25	15.4
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	52.06	15.21
TraesCS3A01G124200.1	Wheat	mitochondrion	44.85	15.13
TraesCS7A01G048400.1	Wheat	cytosol	50.0	15.09
TraesCS7A01G050700.1	Wheat	extracellular	51.55	15.06
TraesCS7D01G042900.1	Wheat	cytosol	49.48	14.93
TraesCSU01G211500.1	Wheat	cytosol	49.48	14.93
TraesCS4B01G090300.1	Wheat	mitochondrion	59.28	14.8
TraesCS4A01G443200.1	Wheat	cytosol	48.97	14.77
TraesCSU01G064000.1	Wheat	plastid	48.97	14.77
TraesCS7D01G042800.1	Wheat	plastid	48.97	14.77
TraesCS4A01G443300.1	Wheat	plastid	48.45	14.62
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	57.22	14.36
TraesCS6B01G278000.1	Wheat	cytosol	55.67	13.15
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	38.66	12.69
KRG93616	Soybean	nucleus	60.31	11.96
KRH18417	Soybean	nucleus	60.31	11.96
KRH44979	Soybean	nucleus, plastid	59.79	11.91
KRH01254	Soybean	nucleus, plastid	59.28	11.81
KRH61688	Soybean	mitochondrion	58.25	11.6
TraesCS5D01G254700.2	Wheat	mitochondrion	24.23	11.08
KRH59753	Soybean	endoplasmic reticulum	49.48	10.45
KRH41069	Soybean	mitochondrion, plastid	49.48	10.45
KRH54115	Soybean	plastid	49.48	10.41
KRH63851	Soybean	plastid	49.48	10.41
KRH63903	Soybean	plastid	47.94	9.83
KRH54048	Soybean	plastid	47.94	9.79
KRH46928	Soybean	endoplasmic reticulum	2.58	4.2
HORVU7Hr1G008380.2	Barley	cytosol	2.58	1.71
KRH03117	Soybean	cytosol	1.55	0.66
HORVU6Hr1G063810.3	Barley	plastid	0.52	0.35
TraesCS7D01G445500.1	Wheat	cytosol	0.0	0.0
HORVU5Hr1G102460.1	Barley	cytosol	0.0	0.0
HORVU4Hr1G008860.1	Barley	cytosol, peroxisome	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0K9F8	InterPro:AAA+_ATPase	EMBL:ACUP02002649	InterPro:ATPase_AAA_core
InterPro:ClpA/B	EnsemblPlantsGene:GLYMA_04G163200	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
EnsemblPlants:KRH63249	ProteinID:KRH63249	ProteinID:KRH63249.1	InterPro:P-loop_NTPase	PFAM:PF07724	PRINTS:PR00300
PANTHER:PTHR11638	PANTHER:PTHR11638:SF146	SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI0006EDD23A

Description

hypothetical protein

Coordinates

chr4:-:40464589..40467748

Molecular Weight (calculated)

21744.5 Da

IEP (calculated)

10.010

GRAVY (calculated)

-0.108

Length

194 amino acids

Sequence
(BLAST)

001: MHWRKRRTKL VKLVWLKYAA VAEAVLRSRA GLGRPQQPTG SFLFLGPTGV GKTELAKALV EQLFDEKNQL VRVDMSEYME QHSVSRLICA PPGYVGHEEG
101: GQLTEAVRRR PYSVLLFNEV EKAHTSVFNT LLQVLDDGRL TDGQGRAVDF RNTVIIMTSN LGAEHLLTGL FGKSSMQVAR DRVMQVVCFL TPFV

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.