Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 9
- cytosol 1
- nucleus 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G15450.1 | KRH05350 | AT2G25000.1 | 21798944 |
| AT5G15450.1 | KRH15674 | AT2G25000.1 | 21798944 |
| AT5G15450.1 | KRH52329 | AT2G25000.1 | 21798944 |
| AT5G15450.1 | KRH61669 | AT2G25000.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18417 | Soybean | nucleus | 97.24 | 97.24 |
| KRH01254 | Soybean | nucleus, plastid | 88.45 | 88.81 |
| KRH44979 | Soybean | nucleus, plastid | 88.34 | 88.71 |
| VIT_14s0108g01500.t01 | Wine grape | plastid | 86.61 | 86.78 |
| Solyc02g088610.2.1 | Tomato | plastid | 85.28 | 85.1 |
| PGSC0003DMT400003652 | Potato | cytosol, plastid | 84.97 | 84.88 |
| Bra023518.1-P | Field mustard | plastid | 82.31 | 83.59 |
| CDX85552 | Canola | cytosol | 21.68 | 83.14 |
| CDX90991 | Canola | plastid | 81.8 | 82.99 |
| AT5G15450.1 | Thale cress | plastid | 81.7 | 82.54 |
| Bra008698.1-P | Field mustard | plastid | 82.0 | 82.43 |
| CDX69524 | Canola | plastid | 82.0 | 82.43 |
| GSMUA_Achr6P16670_001 | Banana | plastid | 78.94 | 82.39 |
| CDY26423 | Canola | plastid | 81.8 | 82.22 |
| CDX85551 | Canola | plastid | 54.91 | 82.11 |
| Zm00001d047302_P002 | Maize | plastid | 79.75 | 80.08 |
| Zm00001d029557_P001 | Maize | plastid | 79.96 | 79.96 |
| EER94678 | Sorghum | plastid | 79.86 | 79.45 |
| Os03t0426900-01 | Rice | plastid | 79.45 | 79.45 |
| TraesCSU01G131300.1 | Wheat | plastid | 78.43 | 78.99 |
| TraesCS5A01G547300.1 | Wheat | golgi, plastid | 78.53 | 78.85 |
| TraesCS4B01G380800.1 | Wheat | plastid | 78.43 | 78.67 |
| HORVU4Hr1G090440.2 | Barley | plastid | 78.94 | 72.97 |
| KRH52355 | Soybean | cytosol, mitochondrion | 47.44 | 71.28 |
| KRH61688 | Soybean | mitochondrion | 66.56 | 66.84 |
| KRH63249 | Soybean | mitochondrion | 11.96 | 60.31 |
| KRH54672 | Soybean | endoplasmic reticulum | 41.21 | 53.52 |
| KRH03117 | Soybean | cytosol | 24.23 | 52.2 |
| KRH46928 | Soybean | endoplasmic reticulum | 6.24 | 51.26 |
| KRH56831 | Soybean | endoplasmic reticulum | 46.01 | 49.4 |
| KRH63851 | Soybean | plastid | 40.8 | 43.28 |
| KRH54115 | Soybean | plastid | 40.7 | 43.17 |
| KRH41069 | Soybean | mitochondrion, plastid | 40.49 | 43.09 |
| KRH59753 | Soybean | endoplasmic reticulum | 40.49 | 43.09 |
| KRH63903 | Soybean | plastid | 36.5 | 37.74 |
| KRH54048 | Soybean | plastid | 36.2 | 37.26 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | EntrezGene:100795662 | MapMan:26.4.2.4 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| EMBL:ACUP02011602 | InterPro:ATPase_AAA_core | InterPro:Chaperonin_ClpB | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 |
| InterPro:Clp_ATPase_C | InterPro:Clp_N | InterPro:Clp_N_dom_sf | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G027900 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009408 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0016485 | GO:GO:0019538 | GO:GO:0042026 | UniProt:I1N6A2 | InterPro:IPR036628 |
| EnsemblPlants:KRG93616 | ProteinID:KRG93616 | ProteinID:KRG93616.1 | ProteinID:KRG93617.1 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 | ScanProsite:PS00871 |
| PANTHER:PTHR11638 | PANTHER:PTHR11638:SF144 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | SUPFAM:SSF81923 |
| TIGRFAMs:TIGR03346 | UniParc:UPI000233E051 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:3485283..3498153
Molecular Weight (calculated)
110207.0 Da
IEP (calculated)
6.547
GRAVY (calculated)
-0.451
Length
978 amino acids
Sequence
(BLAST)
(BLAST)
001: MASATSFSGP TLRPSVPICA HRNNDTRFSQ LRVSFNFPAN PTSLKGLNST PLKKREAFSN GSSRTRRNPL FFVRCTVSSS GKITQQEFTE MAWQAIISAP
101: EVAKENKHQI VETEHLMKAL LEQKNGLARR IFSKVGVDNT RLLETTDKHI QRQPKVVGES TGSMLGRDLE ALIQRARDFK KEYGDSFVSV EHFVLGFAQD
201: KRFGKILFRD FQISQQALKS AIESIRGRQL VIDQDPEGKY EALEKYGKDL TAMAKAGKLD PVIGRDDEIR RCIQILSRRT KNNPVLIGEP GVGKTAISEG
301: LAQRIVQGDV PQALMNRRLI SLDMGALIAG AKYRGEFEDR LKAVLKEVTE SDGQTILFID EIHTVVGAGA SNGAMDAGNL LKPMLGRGEL RCIGATTLDE
401: YRKYIEKDPA LERRFQQVYV DQPSVEDTIS ILRGLRERYE LHHGVRISDS ALVDAAILSD RYISGRFLPD KAIDLVDEAA AKLKMEITSK PTALDEINRS
501: VLKLEMERLS LMNDTDKASK DRLNRLETEL SLLKEKQDEL TGQWEHEKSV MTNLQSIKEE IDRVNLEIQQ AEREYDLNRA AELKYGSLNS LQRQLESAEK
601: ELHEYMNSGK SMLREEVTGN DIAEIVSKWT GIPISKLQQS DREKLLYLEE ELHKRVVGQD PAVKAVAEAI QRSRAGLSDP HRPIASFMFM GPTGVGKTEL
701: AKALASYLFN TEEALVRIDM SEYMEKHTVS RLIGAPPGYV GYEEGGQLTE TVRRRPYAVI LFDEIEKAHS DVFNVFLQIL DDGRVTDSQG RTVSFTNTVI
801: IMTSNVGSQY ILNTDDDTVP KESTYEAIKQ RVMDAARSIF RPEFMNRVDE YIVFQPLDRD QISSIVRLQL ERVQKRIVDR KMKIQVTEAA IQLLGSLGYD
901: PNYGARPVKR VIQQNVENEL AKGILRGEFK EEDTILVDTE VTVLANGQIP QQKLVFRRVE ADSSSAAEDR REGFPQIL
101: EVAKENKHQI VETEHLMKAL LEQKNGLARR IFSKVGVDNT RLLETTDKHI QRQPKVVGES TGSMLGRDLE ALIQRARDFK KEYGDSFVSV EHFVLGFAQD
201: KRFGKILFRD FQISQQALKS AIESIRGRQL VIDQDPEGKY EALEKYGKDL TAMAKAGKLD PVIGRDDEIR RCIQILSRRT KNNPVLIGEP GVGKTAISEG
301: LAQRIVQGDV PQALMNRRLI SLDMGALIAG AKYRGEFEDR LKAVLKEVTE SDGQTILFID EIHTVVGAGA SNGAMDAGNL LKPMLGRGEL RCIGATTLDE
401: YRKYIEKDPA LERRFQQVYV DQPSVEDTIS ILRGLRERYE LHHGVRISDS ALVDAAILSD RYISGRFLPD KAIDLVDEAA AKLKMEITSK PTALDEINRS
501: VLKLEMERLS LMNDTDKASK DRLNRLETEL SLLKEKQDEL TGQWEHEKSV MTNLQSIKEE IDRVNLEIQQ AEREYDLNRA AELKYGSLNS LQRQLESAEK
601: ELHEYMNSGK SMLREEVTGN DIAEIVSKWT GIPISKLQQS DREKLLYLEE ELHKRVVGQD PAVKAVAEAI QRSRAGLSDP HRPIASFMFM GPTGVGKTEL
701: AKALASYLFN TEEALVRIDM SEYMEKHTVS RLIGAPPGYV GYEEGGQLTE TVRRRPYAVI LFDEIEKAHS DVFNVFLQIL DDGRVTDSQG RTVSFTNTVI
801: IMTSNVGSQY ILNTDDDTVP KESTYEAIKQ RVMDAARSIF RPEFMNRVDE YIVFQPLDRD QISSIVRLQL ERVQKRIVDR KMKIQVTEAA IQLLGSLGYD
901: PNYGARPVKR VIQQNVENEL AKGILRGEFK EEDTILVDTE VTVLANGQIP QQKLVFRRVE ADSSSAAEDR REGFPQIL
001: MATATTTATA AFSGVVSVGT ETRRIYSFSH LQPSAAFPAK PSSFKSLKLK QSARLTRRLD HRPFVVRCEA SSSNGRLTQQ EFTEMAWQSI VSSPDVAKEN
101: KQQIVETEHL MKALLEQKNG LARRIFSKIG VDNTKVLEAT EKFIQRQPKV YGDAAGSMLG RDLEALFQRA RQFKKDLKDS YVSVEHLVLA FADDKRFGKQ
201: LFKDFQISER SLKSAIESIR GKQSVIDQDP EGKYEALEKY GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
301: QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQII LFIDEIHTVV GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE
401: KDPALERRFQ QVYVDQPTVE DTISILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME ITSKPTALDE LDRSVIKLEM
501: ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH ERSVMSRLQS IKEEIDRVNL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
601: SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSERDKLL HLEEELHKRV VGQNPAVTAV AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS
701: YMFNTEEALV RIDMSEYMEK HAVSRLIGAP PGYVGYEEGG QLTETVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT DSQGRTVSFT NTVIIMTSNV
801: GSQFILNNTD DDANELSYET IKERVMNAAR SIFRPEFMNR VDEYIVFKPL DREQINRIVR LQLARVQKRI ADRKMKINIT DAAVDLLGSL GYDPNYGARP
901: VKRVIQQNIE NELAKGILRG DFKEEDGILI DTEVTAFSNG QLPQQKLTFK KIESETADAE QEEAAFSK
101: KQQIVETEHL MKALLEQKNG LARRIFSKIG VDNTKVLEAT EKFIQRQPKV YGDAAGSMLG RDLEALFQRA RQFKKDLKDS YVSVEHLVLA FADDKRFGKQ
201: LFKDFQISER SLKSAIESIR GKQSVIDQDP EGKYEALEKY GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
301: QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQII LFIDEIHTVV GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE
401: KDPALERRFQ QVYVDQPTVE DTISILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME ITSKPTALDE LDRSVIKLEM
501: ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH ERSVMSRLQS IKEEIDRVNL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
601: SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSERDKLL HLEEELHKRV VGQNPAVTAV AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS
701: YMFNTEEALV RIDMSEYMEK HAVSRLIGAP PGYVGYEEGG QLTETVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT DSQGRTVSFT NTVIIMTSNV
801: GSQFILNNTD DDANELSYET IKERVMNAAR SIFRPEFMNR VDEYIVFKPL DREQINRIVR LQLARVQKRI ADRKMKINIT DAAVDLLGSL GYDPNYGARP
901: VKRVIQQNIE NELAKGILRG DFKEEDGILI DTEVTAFSNG QLPQQKLTFK KIESETADAE QEEAAFSK
Arabidopsis Description
CLPB3Chaperone protein ClpB3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF37]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.