Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 9
- cytosol 1
- nucleus 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G15450.1 | KRH05350 | AT2G25000.1 | 21798944 |
| AT5G15450.1 | KRH15674 | AT2G25000.1 | 21798944 |
| AT5G15450.1 | KRH52329 | AT2G25000.1 | 21798944 |
| AT5G15450.1 | KRH61669 | AT2G25000.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93616 | Soybean | nucleus | 97.24 | 97.24 |
| KRH01254 | Soybean | nucleus, plastid | 88.96 | 89.32 |
| KRH44979 | Soybean | nucleus, plastid | 88.85 | 89.22 |
| VIT_14s0108g01500.t01 | Wine grape | plastid | 86.71 | 86.89 |
| Solyc02g088610.2.1 | Tomato | plastid | 85.38 | 85.2 |
| PGSC0003DMT400003652 | Potato | cytosol, plastid | 85.07 | 84.98 |
| CDX85552 | Canola | cytosol | 21.98 | 84.31 |
| Bra023518.1-P | Field mustard | plastid | 82.41 | 83.7 |
| CDX90991 | Canola | plastid | 81.9 | 83.09 |
| AT5G15450.1 | Thale cress | plastid | 81.8 | 82.64 |
| Bra008698.1-P | Field mustard | plastid | 82.11 | 82.53 |
| CDX69524 | Canola | plastid | 82.11 | 82.53 |
| GSMUA_Achr6P16670_001 | Banana | plastid | 79.04 | 82.5 |
| CDY26423 | Canola | plastid | 81.9 | 82.32 |
| CDX85551 | Canola | plastid | 54.7 | 81.8 |
| Zm00001d047302_P002 | Maize | plastid | 79.86 | 80.18 |
| Zm00001d029557_P001 | Maize | plastid | 80.06 | 80.06 |
| EER94678 | Sorghum | plastid | 79.96 | 79.55 |
| Os03t0426900-01 | Rice | plastid | 79.55 | 79.55 |
| TraesCSU01G131300.1 | Wheat | plastid | 78.63 | 79.2 |
| TraesCS5A01G547300.1 | Wheat | golgi, plastid | 78.73 | 79.06 |
| TraesCS4B01G380800.1 | Wheat | plastid | 78.63 | 78.87 |
| HORVU4Hr1G090440.2 | Barley | plastid | 79.14 | 73.16 |
| KRH52355 | Soybean | cytosol, mitochondrion | 47.34 | 71.12 |
| KRH61688 | Soybean | mitochondrion | 66.67 | 66.94 |
| KRH63249 | Soybean | mitochondrion | 11.96 | 60.31 |
| KRH54672 | Soybean | endoplasmic reticulum | 41.1 | 53.39 |
| KRH03117 | Soybean | cytosol | 24.23 | 52.2 |
| KRH46928 | Soybean | endoplasmic reticulum | 6.24 | 51.26 |
| KRH56831 | Soybean | endoplasmic reticulum | 45.81 | 49.18 |
| KRH63851 | Soybean | plastid | 41.0 | 43.49 |
| KRH54115 | Soybean | plastid | 40.9 | 43.38 |
| KRH41069 | Soybean | mitochondrion, plastid | 40.59 | 43.2 |
| KRH59753 | Soybean | endoplasmic reticulum | 40.59 | 43.2 |
| KRH63903 | Soybean | plastid | 36.4 | 37.63 |
| KRH54048 | Soybean | plastid | 36.09 | 37.16 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | EntrezGene:100816840 | MapMan:26.4.2.4 | Gene3D:3.40.50.300 | UniProt:A0A0R0GIY4 |
| InterPro:AAA+_ATPase | EMBL:ACUP02008071 | InterPro:ATPase_AAA_core | InterPro:Chaperonin_ClpB | InterPro:ClpA/B | InterPro:ClpA/B_CS1 |
| InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | InterPro:Clp_N | InterPro:Clp_N_dom_sf | ncoils:Coil | EnsemblPlantsGene:GLYMA_13G058600 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009408 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016485 | GO:GO:0019538 | GO:GO:0042026 | InterPro:IPR036628 |
| EnsemblPlants:KRH18417 | ProteinID:KRH18417 | ProteinID:KRH18417.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02861 |
| PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 | ScanProsite:PS00871 | PANTHER:PTHR11638 |
| PANTHER:PTHR11638:SF144 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | SUPFAM:SSF81923 | TIGRFAMs:TIGR03346 |
| UniParc:UPI0001D62D2F | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:15598045..15606712
Molecular Weight (calculated)
110166.0 Da
IEP (calculated)
6.609
GRAVY (calculated)
-0.448
Length
978 amino acids
Sequence
(BLAST)
(BLAST)
001: MASATSFLGL GLRPSVPICA NRNNGIRFSQ FQVSFGFREN STSLKTLNST PLKKREAFSN GSSRTRRNPL FSVRCTVSSS GKITQQEFTE MAWQAIISAP
101: EVAKENKHQI VETEHLMKAL LEQKNGLARR IFSKVGVDNT RLLEATDKHI QRQPKVVGES AGSMLGRDLE ALIQRARDFK KEYGDSFVSV EHFVLGFAQD
201: KRFGKILFRD FQISQQALKS AIESIRGRQS VIDQDPEGKY EALEKYGKDL TAMAKAGKLD PVIGRDDEIR RCIQILSRRT KNNPVLIGEP GVGKTAISEG
301: LAQRIVQGDV PQALMNRRLI SLDMGALIAG AKYRGEFEDR LKAVLKEVTE SDGQTILFID EIHTVVGAGA SNGAMDAGNL LKPMLGRGEL RCIGATTLDE
401: YRKYIEKDPA LERRFQQVYV DQPSVEDTIS ILRGLRERYE LHHGVRISDS ALVDAAILSD RYISGRFLPD KAIDLVDEAA AKLKMEITSK PTALDEINRS
501: VLKLEMERLS LMNDTDKASK DRLNRLETEL SLLKEKQDEL TGQWEHEKSV MTNLQSIKEE IDRVNLEIQQ AEREYDLNRA AELKYGSLNS LQRQLESAEK
601: ELHEYMNSGK SMLREEVTGN DIADIVSKWT GIPISKLQQS DREKLLYLEE ELHKRVVGQD PAVKAVAEAI QRSRAGLSDP HRPIASFMFM GPTGVGKTEL
701: AKALASYLFN TEEALVRIDM SEYMEKHTVS RLIGAPPGYV GYEEGGQLTE TVRRRPYAVI LFDEIEKAHS DVFNVFLQIL DDGRVTDSQG RTVSFTNTVI
801: IMTSNVGSQY ILNTDDDTVP KESAYETIKQ RVMDAARSIF RPEFMNRVDE YIVFQPLDRN QISSIVRLQL ERVQKRIADR KMKIQVTEAA IQLLGSLGYD
901: PNYGARPVKR VIQQNVENEL AKGILRGEFK EEDTILVDTE VTVFANGQLP QQKLVFRRVE ADSNSTVEDR REGFPQIL
101: EVAKENKHQI VETEHLMKAL LEQKNGLARR IFSKVGVDNT RLLEATDKHI QRQPKVVGES AGSMLGRDLE ALIQRARDFK KEYGDSFVSV EHFVLGFAQD
201: KRFGKILFRD FQISQQALKS AIESIRGRQS VIDQDPEGKY EALEKYGKDL TAMAKAGKLD PVIGRDDEIR RCIQILSRRT KNNPVLIGEP GVGKTAISEG
301: LAQRIVQGDV PQALMNRRLI SLDMGALIAG AKYRGEFEDR LKAVLKEVTE SDGQTILFID EIHTVVGAGA SNGAMDAGNL LKPMLGRGEL RCIGATTLDE
401: YRKYIEKDPA LERRFQQVYV DQPSVEDTIS ILRGLRERYE LHHGVRISDS ALVDAAILSD RYISGRFLPD KAIDLVDEAA AKLKMEITSK PTALDEINRS
501: VLKLEMERLS LMNDTDKASK DRLNRLETEL SLLKEKQDEL TGQWEHEKSV MTNLQSIKEE IDRVNLEIQQ AEREYDLNRA AELKYGSLNS LQRQLESAEK
601: ELHEYMNSGK SMLREEVTGN DIADIVSKWT GIPISKLQQS DREKLLYLEE ELHKRVVGQD PAVKAVAEAI QRSRAGLSDP HRPIASFMFM GPTGVGKTEL
701: AKALASYLFN TEEALVRIDM SEYMEKHTVS RLIGAPPGYV GYEEGGQLTE TVRRRPYAVI LFDEIEKAHS DVFNVFLQIL DDGRVTDSQG RTVSFTNTVI
801: IMTSNVGSQY ILNTDDDTVP KESAYETIKQ RVMDAARSIF RPEFMNRVDE YIVFQPLDRN QISSIVRLQL ERVQKRIADR KMKIQVTEAA IQLLGSLGYD
901: PNYGARPVKR VIQQNVENEL AKGILRGEFK EEDTILVDTE VTVFANGQLP QQKLVFRRVE ADSNSTVEDR REGFPQIL
001: MALRRLSKSV SSAIKAQYTL SRPSPLLRSR SLSSSPHYTS IGRPTNSFIG KINNSSITHA TTTHGQLFPL SSPRRFCTTT AQVNQNEFTE MAWEGLINAF
101: DAARESKQQI VESEHLMKAL LEQKDGMARK IFTKAGIDNS SVLQATDLFI SKQPTVSDAS GQRLGSSLSV ILENAKRHKK DMLDSYVSVE HFLLAYYSDT
201: RFGQEFFRDM KLDIQVLKDA IKDVRGDQRV TDRNPESKYQ ALEKYGNDLT EMARRGKLDP VIGRDDEIRR CIQILCRRTK NNPVIIGEPG VGKTAIAEGL
301: AQRIVRGDVP EPLMNRKLIS LDMGSLLAGA KFRGDFEERL KAVMKEVSAS NGQTILFIDE IHTVVGAGAM DGAMDASNLL KPMLGRGELR CIGATTLTEY
401: RKYIEKDPAL ERRFQQVLCV QPSVEDTISI LRGLRERYEL HHGVTISDSA LVSAAVLADR YITERFLPDK AIDLVDEAGA KLKMEITSKP TELDGIDRAV
501: IKLEMEKLSL KNDTDKASKE RLQKIENDLS TLKQKQKELN VQWEKEKSLM TKIRSFKEEI DRVNLEIESA EREYDLNRAA ELKYGTLLSL QRQLEEAEKN
601: LTNFRQFGQS LLREVVTDLD IAEIVSKWTG IPLSNLQQSE REKLVMLEEV LHHRVIGQDM AVKSVADAIR RSRAGLSDPN RPIASFMFMG PTGVGKTELA
701: KALAGYLFNT ENAIVRVDMS EYMEKHSVSR LVGAPPGYVG YEEGGQLTEV VRRRPYSVVL FDEIEKAHPD VFNILLQLLD DGRITDSQGR TVSFKNCVVI
801: MTSNIGSHHI LETLRNNEDS KEAVYEIMKR QVVELARQNF RPEFMNRIDE YIVFQPLDSN EISKIVELQM RRVKNSLEQK KIKLQYTKEA VDLLAQLGFD
901: PNYGARPVKR VIQQMVENEI AVGILKGDFA EEDTVLVDVD HLASDNKLVI KKLESNASAE EMAA
101: DAARESKQQI VESEHLMKAL LEQKDGMARK IFTKAGIDNS SVLQATDLFI SKQPTVSDAS GQRLGSSLSV ILENAKRHKK DMLDSYVSVE HFLLAYYSDT
201: RFGQEFFRDM KLDIQVLKDA IKDVRGDQRV TDRNPESKYQ ALEKYGNDLT EMARRGKLDP VIGRDDEIRR CIQILCRRTK NNPVIIGEPG VGKTAIAEGL
301: AQRIVRGDVP EPLMNRKLIS LDMGSLLAGA KFRGDFEERL KAVMKEVSAS NGQTILFIDE IHTVVGAGAM DGAMDASNLL KPMLGRGELR CIGATTLTEY
401: RKYIEKDPAL ERRFQQVLCV QPSVEDTISI LRGLRERYEL HHGVTISDSA LVSAAVLADR YITERFLPDK AIDLVDEAGA KLKMEITSKP TELDGIDRAV
501: IKLEMEKLSL KNDTDKASKE RLQKIENDLS TLKQKQKELN VQWEKEKSLM TKIRSFKEEI DRVNLEIESA EREYDLNRAA ELKYGTLLSL QRQLEEAEKN
601: LTNFRQFGQS LLREVVTDLD IAEIVSKWTG IPLSNLQQSE REKLVMLEEV LHHRVIGQDM AVKSVADAIR RSRAGLSDPN RPIASFMFMG PTGVGKTELA
701: KALAGYLFNT ENAIVRVDMS EYMEKHSVSR LVGAPPGYVG YEEGGQLTEV VRRRPYSVVL FDEIEKAHPD VFNILLQLLD DGRITDSQGR TVSFKNCVVI
801: MTSNIGSHHI LETLRNNEDS KEAVYEIMKR QVVELARQNF RPEFMNRIDE YIVFQPLDSN EISKIVELQM RRVKNSLEQK KIKLQYTKEA VDLLAQLGFD
901: PNYGARPVKR VIQQMVENEI AVGILKGDFA EEDTVLVDVD HLASDNKLVI KKLESNASAE EMAA
Arabidopsis Description
CLPB4Chaperone protein ClpB4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VYJ7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.