Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 10
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400019058 | |
| PGSC0003DMT400019061 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G15450.1 | PGSC0003DMT400019058 | AT2G25000.1 | 21798944 |
| AT5G15450.1 | PGSC0003DMT400019061 | AT2G25000.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g088610.2.1 | Tomato | plastid | 98.26 | 98.16 |
| VIT_14s0108g01500.t01 | Wine grape | plastid | 87.54 | 87.81 |
| KRH44979 | Soybean | nucleus, plastid | 84.88 | 85.32 |
| KRH01254 | Soybean | nucleus, plastid | 84.88 | 85.32 |
| KRH18417 | Soybean | nucleus | 84.98 | 85.07 |
| KRG93616 | Soybean | nucleus | 84.88 | 84.97 |
| Bra023518.1-P | Field mustard | plastid | 82.53 | 83.9 |
| CDX90991 | Canola | plastid | 82.12 | 83.4 |
| GSMUA_Achr6P16670_001 | Banana | plastid | 79.67 | 83.24 |
| CDX85552 | Canola | cytosol | 21.65 | 83.14 |
| Bra008698.1-P | Field mustard | plastid | 82.53 | 83.04 |
| CDX69524 | Canola | plastid | 82.53 | 83.04 |
| CDY26423 | Canola | plastid | 82.23 | 82.73 |
| CDX85551 | Canola | plastid | 55.16 | 82.57 |
| AT5G15450.1 | Thale cress | plastid | 81.1 | 82.02 |
| Zm00001d029557_P001 | Maize | plastid | 78.96 | 79.04 |
| Zm00001d047302_P002 | Maize | plastid | 78.55 | 78.95 |
| EER94678 | Sorghum | plastid | 79.06 | 78.74 |
| TraesCSU01G131300.1 | Wheat | plastid | 77.94 | 78.58 |
| Os03t0426900-01 | Rice | plastid | 78.35 | 78.43 |
| TraesCS4B01G380800.1 | Wheat | plastid | 77.94 | 78.26 |
| TraesCS5A01G547300.1 | Wheat | golgi, plastid | 77.83 | 78.23 |
| HORVU4Hr1G090440.2 | Barley | plastid | 78.24 | 72.4 |
| PGSC0003DMT400063352 | Potato | nucleus | 45.35 | 48.68 |
| PGSC0003DMT400037527 | Potato | cytosol | 39.63 | 42.04 |
| PGSC0003DMT400036961 | Potato | plastid | 39.63 | 41.95 |
| PGSC0003DMT400054236 | Potato | plastid | 38.61 | 41.54 |
| PGSC0003DMT400036893 | Potato | plastid | 35.44 | 35.96 |
| PGSC0003DMT400037525 | Potato | plastid | 3.47 | 13.39 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | EntrezGene:102592268 | MapMan:26.4.2.4 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_core | InterPro:Chaperonin_ClpB | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C |
| InterPro:Clp_N | InterPro:Clp_N_dom_sf | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009408 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0016485 | GO:GO:0019538 | GO:GO:0042026 | InterPro:IPR036628 | UniProt:M0ZM32 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 | EnsemblPlantsGene:PGSC0003DMG400001442 |
| PGSC:PGSC0003DMG400001442 | EnsemblPlants:PGSC0003DMT400003652 | PRINTS:PR00300 | ScanProsite:PS00870 | ScanProsite:PS00871 | PANTHER:PTHR11638 |
| PANTHER:PTHR11638:SF144 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | SUPFAM:SSF81923 | TIGRFAMs:TIGR03346 |
| UniParc:UPI00029680EC | RefSeq:XP_006338388.1 | SEG:seg | : | : | : |
Description
Heat shock protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001442]
Coordinates
chr2:+:45743280..45750696
Molecular Weight (calculated)
110327.0 Da
IEP (calculated)
6.491
GRAVY (calculated)
-0.461
Length
979 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTVTSFSGV QFCVPSSSSN SSSRVALFSS HSAPYLNFSG KSRVLDKCNS LKLKRKDVFF TRKTEKLSQG SRLTIRCDAS SGRITQQDFT EMAWQAIVAS
101: PEIAKENKHQ IVETEHLMKA LLEQKNGLAR RIFSKAGVDN TRLLEATDKF IRQQPKVIGE TAGSMLGREL EGLMQRAREY KKEYGDSFVS VEHLVLGFVQ
201: DKRFGKQLFN DFQISLKTLK TAIESIRGRQ NVIDQDPEGK YESLEKYGKD LTAMARAGKL DPVIGRDDEI RRCIQILSRR TKNNPVLIGE PGVGKTAISE
301: GLAQRIVQGD VPQALMNRKL ISLDMGALIA GAKYRGEFED RLKAVLKEVT ESEGQIILFI DEIHTVVGAG ATNGAMDAGN LLKPMLGRGE LRCIGATTLD
401: EYRKYIEKDP ALERRFQQVY VDQPTVEDTV SILRGLRERY ELHHGVRISD TALVDAAILS DRYISGRFLP DKAIDLVDEA AAKLKMEITS KPTALDEINR
501: AVLKLEMERL SLTNDTDRAS KDRLNRLEAE LSLLKERQAE LTEQWEHEKS VMTRLQSIKE EIDRVNLEIQ QAEREYDLNR AAELKYGSLN TLQRQLEAAE
601: KELSDYMKSG KSMLREEVTG NDIAEIVSKW TGIPVSKLQQ SEREKLLHLE EELHKRVVGQ DPAVRAVAEA IQRSRAGLSD PHRPIASFMF MGPTGVGKTE
701: LAKALANYLF NTEEALVRID MSEYMEKHAV SRLIGAPPGY VGYEEGGQLT EIVRRRPYAV ILFDEIEKAH SDVFNVFLQI LDDGRVTDSQ GRTVSFTNTV
801: IIMTSNVGSQ YILNTDDDDN SSKEATYQTI KRRVMDAARA VFRPEFMNRV DEYIVFQPLD RDQISSIVRL QLERVQQRLA DRKMKIEVSE AAIQLLGSLG
901: YDPNYGARPV KRVIQQNVEN ELAKGILRGE FKDEDTILVD TEVSAFSNGQ LPQQKLVFKR QESCSDSPAE NQEAFSQKL
101: PEIAKENKHQ IVETEHLMKA LLEQKNGLAR RIFSKAGVDN TRLLEATDKF IRQQPKVIGE TAGSMLGREL EGLMQRAREY KKEYGDSFVS VEHLVLGFVQ
201: DKRFGKQLFN DFQISLKTLK TAIESIRGRQ NVIDQDPEGK YESLEKYGKD LTAMARAGKL DPVIGRDDEI RRCIQILSRR TKNNPVLIGE PGVGKTAISE
301: GLAQRIVQGD VPQALMNRKL ISLDMGALIA GAKYRGEFED RLKAVLKEVT ESEGQIILFI DEIHTVVGAG ATNGAMDAGN LLKPMLGRGE LRCIGATTLD
401: EYRKYIEKDP ALERRFQQVY VDQPTVEDTV SILRGLRERY ELHHGVRISD TALVDAAILS DRYISGRFLP DKAIDLVDEA AAKLKMEITS KPTALDEINR
501: AVLKLEMERL SLTNDTDRAS KDRLNRLEAE LSLLKERQAE LTEQWEHEKS VMTRLQSIKE EIDRVNLEIQ QAEREYDLNR AAELKYGSLN TLQRQLEAAE
601: KELSDYMKSG KSMLREEVTG NDIAEIVSKW TGIPVSKLQQ SEREKLLHLE EELHKRVVGQ DPAVRAVAEA IQRSRAGLSD PHRPIASFMF MGPTGVGKTE
701: LAKALANYLF NTEEALVRID MSEYMEKHAV SRLIGAPPGY VGYEEGGQLT EIVRRRPYAV ILFDEIEKAH SDVFNVFLQI LDDGRVTDSQ GRTVSFTNTV
801: IIMTSNVGSQ YILNTDDDDN SSKEATYQTI KRRVMDAARA VFRPEFMNRV DEYIVFQPLD RDQISSIVRL QLERVQQRLA DRKMKIEVSE AAIQLLGSLG
901: YDPNYGARPV KRVIQQNVEN ELAKGILRGE FKDEDTILVD TEVSAFSNGQ LPQQKLVFKR QESCSDSPAE NQEAFSQKL
001: MATATTTATA AFSGVVSVGT ETRRIYSFSH LQPSAAFPAK PSSFKSLKLK QSARLTRRLD HRPFVVRCEA SSSNGRLTQQ EFTEMAWQSI VSSPDVAKEN
101: KQQIVETEHL MKALLEQKNG LARRIFSKIG VDNTKVLEAT EKFIQRQPKV YGDAAGSMLG RDLEALFQRA RQFKKDLKDS YVSVEHLVLA FADDKRFGKQ
201: LFKDFQISER SLKSAIESIR GKQSVIDQDP EGKYEALEKY GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
301: QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQII LFIDEIHTVV GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE
401: KDPALERRFQ QVYVDQPTVE DTISILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME ITSKPTALDE LDRSVIKLEM
501: ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH ERSVMSRLQS IKEEIDRVNL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
601: SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSERDKLL HLEEELHKRV VGQNPAVTAV AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS
701: YMFNTEEALV RIDMSEYMEK HAVSRLIGAP PGYVGYEEGG QLTETVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT DSQGRTVSFT NTVIIMTSNV
801: GSQFILNNTD DDANELSYET IKERVMNAAR SIFRPEFMNR VDEYIVFKPL DREQINRIVR LQLARVQKRI ADRKMKINIT DAAVDLLGSL GYDPNYGARP
901: VKRVIQQNIE NELAKGILRG DFKEEDGILI DTEVTAFSNG QLPQQKLTFK KIESETADAE QEEAAFSK
101: KQQIVETEHL MKALLEQKNG LARRIFSKIG VDNTKVLEAT EKFIQRQPKV YGDAAGSMLG RDLEALFQRA RQFKKDLKDS YVSVEHLVLA FADDKRFGKQ
201: LFKDFQISER SLKSAIESIR GKQSVIDQDP EGKYEALEKY GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
301: QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQII LFIDEIHTVV GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE
401: KDPALERRFQ QVYVDQPTVE DTISILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME ITSKPTALDE LDRSVIKLEM
501: ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH ERSVMSRLQS IKEEIDRVNL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
601: SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSERDKLL HLEEELHKRV VGQNPAVTAV AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS
701: YMFNTEEALV RIDMSEYMEK HAVSRLIGAP PGYVGYEEGG QLTETVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT DSQGRTVSFT NTVIIMTSNV
801: GSQFILNNTD DDANELSYET IKERVMNAAR SIFRPEFMNR VDEYIVFKPL DREQINRIVR LQLARVQKRI ADRKMKINIT DAAVDLLGSL GYDPNYGARP
901: VKRVIQQNIE NELAKGILRG DFKEEDGILI DTEVTAFSNG QLPQQKLTFK KIESETADAE QEEAAFSK
Arabidopsis Description
CLPB3Chaperone protein ClpB3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF37]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.