Factsheet for AT5G15450.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023518.1-P	Field mustard	plastid	95.14	95.64
CDX90991	Canola	plastid	94.83	95.23
CDX85551	Canola	plastid	64.15	94.95
CDX69524	Canola	plastid	95.35	94.86
Bra008698.1-P	Field mustard	plastid	95.35	94.86
CDY26423	Canola	plastid	95.14	94.66
CDX85552	Canola	cytosol	24.9	94.51
KRH01254	Soybean	nucleus, plastid	84.09	83.57
KRH44979	Soybean	nucleus, plastid	83.78	83.26
VIT_14s0108g01500.t01	Wine grape	plastid	83.37	82.68
GSMUA_Achr6P16670_001	Banana	plastid	79.44	82.07
KRH18417	Soybean	nucleus	82.64	81.8
KRG93616	Soybean	nucleus	82.54	81.7
PGSC0003DMT400003652	Potato	cytosol, plastid	82.02	81.1
Solyc02g088610.2.1	Tomato	plastid	82.02	81.02
Os03t0426900-01	Rice	plastid	80.06	79.24
Zm00001d047302_P002	Maize	plastid	78.82	78.34
Zm00001d029557_P001	Maize	plastid	79.13	78.32
TraesCSU01G131300.1	Wheat	plastid	78.51	78.27
TraesCS4B01G380800.1	Wheat	plastid	78.51	77.95
TraesCS5A01G547300.1	Wheat	golgi, plastid	78.31	77.82
EER94678	Sorghum	plastid	78.93	77.72
HORVU4Hr1G090440.2	Barley	plastid	78.2	71.55
AT2G25140.1	Thale cress	mitochondrion	65.19	65.46
AT4G14670.1	Thale cress	cytosol	31.2	48.48
AT1G74310.1	Thale cress	nucleus	45.35	48.19
AT5G50920.1	Thale cress	plastid	39.26	40.9
AT3G48870.3	Thale cress	cytosol, plastid	39.05	39.71
AT5G51070.1	Thale cress	plastid	35.85	36.72
AT3G45450.1	Thale cress	cytosol	11.36	32.26
AT4G14675.1	Thale cress	cytosol	3.51	21.38

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:26.4.2.4	Gene3D:3.40.50.300	EntrezGene:831398	InterPro:AAA+_ATPase
ProteinID:AED92162.1	Symbol:APG6	ArrayExpress:AT5G15450	EnsemblPlantsGene:AT5G15450	RefSeq:AT5G15450	TAIR:AT5G15450
RefSeq:AT5G15450-TAIR-G	EnsemblPlants:AT5G15450.1	TAIR:AT5G15450.1	InterPro:ATPase_AAA_core	Unigene:At.66737	EMBL:BT000447
EMBL:BT002569	ProteinID:CAC01744.1	InterPro:Chaperonin_ClpB	InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2
InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009408	GO:GO:0009507	GO:GO:0009532
GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043
GO:GO:0016485	GO:GO:0019538	GO:GO:0042026	InterPro:IPR036628	RefSeq:NP_568314.1	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF02861	PFAM:PF07724	PFAM:PF10431	PO:PO:0000013	PO:PO:0000025
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0020148	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00300	ScanProsite:PS00870
ScanProsite:PS00871	PANTHER:PTHR11638	PANTHER:PTHR11638:SF144	UniProt:Q9LF37	SMART:SM00382	SMART:SM01086
SUPFAM:SSF52540	SUPFAM:SSF81923	TIGRFAMs:TIGR03346	UniParc:UPI00000A90C8	SEG:seg	:

Description

CLPB3Chaperone protein ClpB3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF37]

Coordinates

chr5:-:5014212..5018347

Molecular Weight (calculated)

108949.0 Da

IEP (calculated)

6.081

GRAVY (calculated)

-0.447

Length

968 amino acids

Sequence
(BLAST)

001: MATATTTATA AFSGVVSVGT ETRRIYSFSH LQPSAAFPAK PSSFKSLKLK QSARLTRRLD HRPFVVRCEA SSSNGRLTQQ EFTEMAWQSI VSSPDVAKEN
101: KQQIVETEHL MKALLEQKNG LARRIFSKIG VDNTKVLEAT EKFIQRQPKV YGDAAGSMLG RDLEALFQRA RQFKKDLKDS YVSVEHLVLA FADDKRFGKQ
201: LFKDFQISER SLKSAIESIR GKQSVIDQDP EGKYEALEKY GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
301: QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQII LFIDEIHTVV GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE
401: KDPALERRFQ QVYVDQPTVE DTISILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME ITSKPTALDE LDRSVIKLEM
501: ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH ERSVMSRLQS IKEEIDRVNL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
601: SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSERDKLL HLEEELHKRV VGQNPAVTAV AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS
701: YMFNTEEALV RIDMSEYMEK HAVSRLIGAP PGYVGYEEGG QLTETVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT DSQGRTVSFT NTVIIMTSNV
801: GSQFILNNTD DDANELSYET IKERVMNAAR SIFRPEFMNR VDEYIVFKPL DREQINRIVR LQLARVQKRI ADRKMKINIT DAAVDLLGSL GYDPNYGARP
901: VKRVIQQNIE NELAKGILRG DFKEEDGILI DTEVTAFSNG QLPQQKLTFK KIESETADAE QEEAAFSK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.