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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56280 Canola mitochondrion 86.0 85.11
Bra007816.1-P Field mustard mitochondrion 85.89 85.01
CDX76768 Canola mitochondrion 85.79 84.99
Solyc06g011380.2.1 Tomato cytosol, plastid 17.84 83.9
KRH52355 Soybean cytosol, mitochondrion 54.25 80.34
GSMUA_Achr9P22420_001 Banana cytosol 72.51 79.16
VIT_04s0008g05870.t01 Wine grape mitochondrion 77.18 77.34
KRH61688 Soybean mitochondrion 77.7 76.9
EES06386 Sorghum mitochondrion 75.52 73.54
Os02t0181900-01 Rice mitochondrion 73.76 72.33
HORVU6Hr1G028690.1 Barley mitochondrion 73.03 71.54
TraesCS6A01G146400.1 Wheat mitochondrion 72.82 70.84
TraesCS6D01G135600.1 Wheat golgi 72.72 70.74
TraesCS6B01G174500.1 Wheat mitochondrion 72.61 70.64
AT5G15450.1 Thale cress plastid 65.46 65.19
AT4G14670.1 Thale cress cytosol 30.6 47.35
AT1G74310.1 Thale cress nucleus 43.67 46.21
AT5G50920.1 Thale cress plastid 40.15 41.66
AT3G48870.3 Thale cress cytosol, plastid 39.32 39.81
AT5G51070.1 Thale cress plastid 35.89 36.61
AT3G45450.1 Thale cress cytosol 12.03 34.02
AT4G14675.1 Thale cress cytosol 3.94 23.9
Protein Annotations
Gene3D:1.10.1780.10Gene3D:1.10.8.60MapMan:26.4.2.4Gene3D:3.40.50.300EntrezGene:817052InterPro:AAA+_ATPase
ProteinID:AEC07662.1ArrayExpress:AT2G25140EnsemblPlantsGene:AT2G25140RefSeq:AT2G25140TAIR:AT2G25140RefSeq:AT2G25140-TAIR-G
EnsemblPlants:AT2G25140.1TAIR:AT2G25140.1InterPro:ATPase_AAA_coreEMBL:AY070722Unigene:At.28343EMBL:BT002223
InterPro:Chaperonin_ClpBInterPro:ClpA/BInterPro:ClpA/B_CS1InterPro:ClpA/B_CS2InterPro:Clp_ATPase_CInterPro:Clp_N
InterPro:Clp_N_dom_sfncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009408GO:GO:0009507GO:GO:0009536GO:GO:0009570
GO:GO:0009628GO:GO:0009941GO:GO:0009987GO:GO:0016485GO:GO:0019538GO:GO:0042026
Symbol:HSP98.7InterPro:IPR036628RefSeq:NP_565586.1InterPro:P-loop_NTPasePFAM:PF00004PFAM:PF02861
PFAM:PF07724PFAM:PF10431PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PRINTS:PR00300ScanProsite:PS00870ScanProsite:PS00871PANTHER:PTHR11638
PANTHER:PTHR11638:SF86UniProt:Q8VYJ7SMART:SM00382SMART:SM01086SUPFAM:SSF52540SUPFAM:SSF81923
TIGRFAMs:TIGR03346UniParc:UPI00000AC6EDSEG:seg:::
Description
CLPB4Chaperone protein ClpB4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VYJ7]
Coordinates
chr2:-:10697629..10702203
Molecular Weight (calculated)
108669.0 Da
IEP (calculated)
6.969
GRAVY (calculated)
-0.396
Length
964 amino acids
Sequence
(BLAST)
001: MALRRLSKSV SSAIKAQYTL SRPSPLLRSR SLSSSPHYTS IGRPTNSFIG KINNSSITHA TTTHGQLFPL SSPRRFCTTT AQVNQNEFTE MAWEGLINAF
101: DAARESKQQI VESEHLMKAL LEQKDGMARK IFTKAGIDNS SVLQATDLFI SKQPTVSDAS GQRLGSSLSV ILENAKRHKK DMLDSYVSVE HFLLAYYSDT
201: RFGQEFFRDM KLDIQVLKDA IKDVRGDQRV TDRNPESKYQ ALEKYGNDLT EMARRGKLDP VIGRDDEIRR CIQILCRRTK NNPVIIGEPG VGKTAIAEGL
301: AQRIVRGDVP EPLMNRKLIS LDMGSLLAGA KFRGDFEERL KAVMKEVSAS NGQTILFIDE IHTVVGAGAM DGAMDASNLL KPMLGRGELR CIGATTLTEY
401: RKYIEKDPAL ERRFQQVLCV QPSVEDTISI LRGLRERYEL HHGVTISDSA LVSAAVLADR YITERFLPDK AIDLVDEAGA KLKMEITSKP TELDGIDRAV
501: IKLEMEKLSL KNDTDKASKE RLQKIENDLS TLKQKQKELN VQWEKEKSLM TKIRSFKEEI DRVNLEIESA EREYDLNRAA ELKYGTLLSL QRQLEEAEKN
601: LTNFRQFGQS LLREVVTDLD IAEIVSKWTG IPLSNLQQSE REKLVMLEEV LHHRVIGQDM AVKSVADAIR RSRAGLSDPN RPIASFMFMG PTGVGKTELA
701: KALAGYLFNT ENAIVRVDMS EYMEKHSVSR LVGAPPGYVG YEEGGQLTEV VRRRPYSVVL FDEIEKAHPD VFNILLQLLD DGRITDSQGR TVSFKNCVVI
801: MTSNIGSHHI LETLRNNEDS KEAVYEIMKR QVVELARQNF RPEFMNRIDE YIVFQPLDSN EISKIVELQM RRVKNSLEQK KIKLQYTKEA VDLLAQLGFD
901: PNYGARPVKR VIQQMVENEI AVGILKGDFA EEDTVLVDVD HLASDNKLVI KKLESNASAE EMAA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.