Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029557_P001 | Maize | plastid | 97.02 | 96.63 |
| EER94678 | Sorghum | plastid | 97.13 | 96.24 |
| Os03t0426900-01 | Rice | plastid | 92.2 | 91.82 |
| TraesCSU01G131300.1 | Wheat | plastid | 90.25 | 90.53 |
| TraesCS5A01G547300.1 | Wheat | golgi, plastid | 90.25 | 90.25 |
| TraesCS4B01G380800.1 | Wheat | plastid | 90.14 | 90.05 |
| HORVU4Hr1G090440.2 | Barley | plastid | 90.14 | 82.99 |
| GSMUA_Achr6P16670_001 | Banana | plastid | 78.23 | 81.32 |
| VIT_14s0108g01500.t01 | Wine grape | plastid | 80.8 | 80.64 |
| KRH18417 | Soybean | nucleus | 80.18 | 79.86 |
| KRH01254 | Soybean | nucleus, plastid | 79.77 | 79.77 |
| KRG93616 | Soybean | nucleus | 80.08 | 79.75 |
| KRH44979 | Soybean | nucleus, plastid | 79.57 | 79.57 |
| Bra023518.1-P | Field mustard | plastid | 78.34 | 79.23 |
| AT5G15450.1 | Thale cress | plastid | 78.34 | 78.82 |
| CDX85551 | Canola | plastid | 52.87 | 78.75 |
| PGSC0003DMT400003652 | Potato | cytosol, plastid | 78.95 | 78.55 |
| CDX90991 | Canola | plastid | 77.72 | 78.53 |
| CDY26423 | Canola | plastid | 78.34 | 78.42 |
| CDX69524 | Canola | plastid | 78.34 | 78.42 |
| Bra008698.1-P | Field mustard | plastid | 78.34 | 78.42 |
| Solyc02g088610.2.1 | Tomato | plastid | 78.75 | 78.27 |
| CDX85552 | Canola | cytosol | 19.92 | 76.08 |
| Zm00001d015520_P001 | Maize | mitochondrion | 66.94 | 65.99 |
| Zm00001d038806_P001 | Maize | nucleus | 45.89 | 49.01 |
| Zm00001d029672_P004 | Maize | plastid | 10.88 | 45.3 |
| Zm00001d003894_P004 | Maize | plastid | 40.14 | 42.45 |
| Zm00001d024009_P001 | Maize | plastid | 40.14 | 42.45 |
| Zm00001d025273_P019 | Maize | plastid | 40.04 | 42.35 |
| Zm00001d036813_P001 | Maize | cytosol | 4.62 | 39.82 |
| Zm00001d039640_P001 | Maize | cytoskeleton, cytosol, nucleus | 5.85 | 38.0 |
| Zm00001d003847_P001 | Maize | plastid | 35.83 | 37.45 |
| Zm00001d016664_P001 | Maize | plastid | 36.34 | 37.38 |
| Zm00001d008786_P001 | Maize | plastid | 4.83 | 26.4 |
| Zm00001d039497_P002 | Maize | nucleus | 1.13 | 14.47 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:26.4.2.4 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | ProteinID:AQL06126.1 |
| ProteinID:AQL06127.1 | InterPro:ATPase_AAA_core | InterPro:Chaperonin_ClpB | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 |
| InterPro:Clp_ATPase_C | InterPro:Clp_N | InterPro:Clp_N_dom_sf | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0016485 | GO:GO:0019538 | GO:GO:0042026 | InterPro:IPR036628 | UniProt:K7VD78 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 |
| ScanProsite:PS00871 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF144 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 |
| SUPFAM:SSF81923 | TIGRFAMs:TIGR03346 | UniParc:UPI000221FD89 | EnsemblPlantsGene:Zm00001d047302 | EnsemblPlants:Zm00001d047302_P002 | EnsemblPlants:Zm00001d047302_T002 |
| SEG:seg | : | : | : | : | : |
Description
Putative chaperone clbp family protein
Coordinates
chr9:+:126065827..126072415
Molecular Weight (calculated)
108779.0 Da
IEP (calculated)
8.034
GRAVY (calculated)
-0.420
Length
974 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPPLSAD VLSFLTSAPA APTPVVAAAW GAARAGPVRG KAALRTTRGG RGGVLAPLVG RRPRRTPLSV RCNATSRDGR ITQQEFTEMA WQAIVSSPEV
101: AKESKHQIVE TEHLMKSLLE QRNGLARRIF SKAGVDNTRL LDATKKFIQR QPKVLGEEPG SMLGRDLEAL IQRARDFKKE YGDSYVSVEH LVLGFAEDKR
201: FGTQLFKDFQ ITVKTLKSAI ESIRGKQNVI DQDPEGKYEA LDKYGKDLTA MARQGKLDPV IGRDDEIRRC IQILSRRTKN NPVLIGEPGV GKTAIAEGLA
301: QRIVQGDVPQ ALTNRRLIAL DMGALIAGAK YRGEFEDRLK AVLKEVTDSD GQTILFIDEI HTVVGAGATN GAMDAGNLLK PMLGRGELRC IGATTLDEYR
401: KYIEKDPALE RRFQQVYVDQ PSVEDTISIL RGLRERYELH HGVRISDSAL VAAAVLSDRY ISGRFLPDKA IDLVDESAAK LKMEITSKPT ALDEIDRAVL
501: KIEMERLSLT NDTDKASKDR LSRLEAELSL LKDKQRQLTE KWEHEKSVMT KIQSIKEEID RVNVEIQQAE REYDLNRAAE LKYGSLNALQ RQLQTTEKEL
601: DEYQSSGKSM LREEVTQDDI AEIVSRWTGI PVSKLKQSDR EKLLYLEEEL HKRVVGQDPA VKAVAEAIQR SRAGLSDPNR PIASFMFMGP TGVGKTELAK
701: ALASFMFNTE EAVVRIDMSE YMEKHSVSRL IGAPPGYVGY EEGGQLTEAV RRRPYSVVLF DEIEKAHLDV FNVFLQILDD GRVTDSQGRK VSFTNSIIIM
801: TSNVGSQYIL NMDEEDGSSD SAYENIKRRV MDAARSVFRP EFMNRVDEYI VFKPLEREQI NSIVKLQLAR VQKRIADRKI KLDVSPGAIE FLGSLGYDPN
901: YGARPVKRVI QQYVENELAK GILRGDFKDE DSIFVDTQVT VPSNGQLPLR KLVFQKVGEQ SKPAAEGEKF LPAV
101: AKESKHQIVE TEHLMKSLLE QRNGLARRIF SKAGVDNTRL LDATKKFIQR QPKVLGEEPG SMLGRDLEAL IQRARDFKKE YGDSYVSVEH LVLGFAEDKR
201: FGTQLFKDFQ ITVKTLKSAI ESIRGKQNVI DQDPEGKYEA LDKYGKDLTA MARQGKLDPV IGRDDEIRRC IQILSRRTKN NPVLIGEPGV GKTAIAEGLA
301: QRIVQGDVPQ ALTNRRLIAL DMGALIAGAK YRGEFEDRLK AVLKEVTDSD GQTILFIDEI HTVVGAGATN GAMDAGNLLK PMLGRGELRC IGATTLDEYR
401: KYIEKDPALE RRFQQVYVDQ PSVEDTISIL RGLRERYELH HGVRISDSAL VAAAVLSDRY ISGRFLPDKA IDLVDESAAK LKMEITSKPT ALDEIDRAVL
501: KIEMERLSLT NDTDKASKDR LSRLEAELSL LKDKQRQLTE KWEHEKSVMT KIQSIKEEID RVNVEIQQAE REYDLNRAAE LKYGSLNALQ RQLQTTEKEL
601: DEYQSSGKSM LREEVTQDDI AEIVSRWTGI PVSKLKQSDR EKLLYLEEEL HKRVVGQDPA VKAVAEAIQR SRAGLSDPNR PIASFMFMGP TGVGKTELAK
701: ALASFMFNTE EAVVRIDMSE YMEKHSVSRL IGAPPGYVGY EEGGQLTEAV RRRPYSVVLF DEIEKAHLDV FNVFLQILDD GRVTDSQGRK VSFTNSIIIM
801: TSNVGSQYIL NMDEEDGSSD SAYENIKRRV MDAARSVFRP EFMNRVDEYI VFKPLEREQI NSIVKLQLAR VQKRIADRKI KLDVSPGAIE FLGSLGYDPN
901: YGARPVKRVI QQYVENELAK GILRGDFKDE DSIFVDTQVT VPSNGQLPLR KLVFQKVGEQ SKPAAEGEKF LPAV
001: MATATTTATA AFSGVVSVGT ETRRIYSFSH LQPSAAFPAK PSSFKSLKLK QSARLTRRLD HRPFVVRCEA SSSNGRLTQQ EFTEMAWQSI VSSPDVAKEN
101: KQQIVETEHL MKALLEQKNG LARRIFSKIG VDNTKVLEAT EKFIQRQPKV YGDAAGSMLG RDLEALFQRA RQFKKDLKDS YVSVEHLVLA FADDKRFGKQ
201: LFKDFQISER SLKSAIESIR GKQSVIDQDP EGKYEALEKY GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
301: QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQII LFIDEIHTVV GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE
401: KDPALERRFQ QVYVDQPTVE DTISILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME ITSKPTALDE LDRSVIKLEM
501: ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH ERSVMSRLQS IKEEIDRVNL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
601: SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSERDKLL HLEEELHKRV VGQNPAVTAV AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS
701: YMFNTEEALV RIDMSEYMEK HAVSRLIGAP PGYVGYEEGG QLTETVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT DSQGRTVSFT NTVIIMTSNV
801: GSQFILNNTD DDANELSYET IKERVMNAAR SIFRPEFMNR VDEYIVFKPL DREQINRIVR LQLARVQKRI ADRKMKINIT DAAVDLLGSL GYDPNYGARP
901: VKRVIQQNIE NELAKGILRG DFKEEDGILI DTEVTAFSNG QLPQQKLTFK KIESETADAE QEEAAFSK
101: KQQIVETEHL MKALLEQKNG LARRIFSKIG VDNTKVLEAT EKFIQRQPKV YGDAAGSMLG RDLEALFQRA RQFKKDLKDS YVSVEHLVLA FADDKRFGKQ
201: LFKDFQISER SLKSAIESIR GKQSVIDQDP EGKYEALEKY GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV
301: QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQII LFIDEIHTVV GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE
401: KDPALERRFQ QVYVDQPTVE DTISILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME ITSKPTALDE LDRSVIKLEM
501: ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH ERSVMSRLQS IKEEIDRVNL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL
601: SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSERDKLL HLEEELHKRV VGQNPAVTAV AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS
701: YMFNTEEALV RIDMSEYMEK HAVSRLIGAP PGYVGYEEGG QLTETVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT DSQGRTVSFT NTVIIMTSNV
801: GSQFILNNTD DDANELSYET IKERVMNAAR SIFRPEFMNR VDEYIVFKPL DREQINRIVR LQLARVQKRI ADRKMKINIT DAAVDLLGSL GYDPNYGARP
901: VKRVIQQNIE NELAKGILRG DFKEEDGILI DTEVTAFSNG QLPQQKLTFK KIESETADAE QEEAAFSK
Arabidopsis Description
CLPB3Chaperone protein ClpB3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF37]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.