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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytoskeleton 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003894_P004 Maize plastid 53.33 8.69
Zm00001d025273_P019 Maize plastid 52.67 8.58
Zm00001d024009_P001 Maize plastid 51.33 8.36
Zm00001d038806_P001 Maize nucleus 36.0 5.92
Zm00001d016664_P001 Maize plastid 37.33 5.91
Zm00001d003847_P001 Maize plastid 36.67 5.9
Zm00001d047302_P002 Maize plastid 38.0 5.85
Zm00001d029557_P001 Maize plastid 38.0 5.83
Zm00001d015520_P001 Maize mitochondrion 36.0 5.47
Zm00001d029672_P004 Maize plastid 6.0 3.85
Zm00001d008786_P001 Maize plastid 3.33 2.81
Zm00001d036813_P001 Maize cytosol 2.0 2.65
Zm00001d039497_P002 Maize nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:Zm00001d039640_P001EnsemblPlants:Zm00001d039640_T001EnsemblPlantsGene:Zm00001d039640Gene3D:3.40.50.300GO:GO:0003674GO:GO:0003824
GO:GO:0016787InterPro:P-loop_NTPasePANTHER:PTHR43572PANTHER:PTHR43572:SF8ProteinID:ONM29565.1SUPFAM:SSF52540
UniParc:UPI00084417CFUniProt:A0A1D6MJX7MapMan:35.1:::
Description
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Coordinates
chr3:+:9896408..9899890
Molecular Weight (calculated)
16099.3 Da
IEP (calculated)
8.760
GRAVY (calculated)
-0.535
Length
150 amino acids
Sequence
(BLAST)
001: MEVAPMAGAL VEGKLDPVVG RQDQIERVTQ ILGRRTKNNP CLIGEPGVGK TAIAEGLAQR IANWDVPETI EGKKSVGSMD EDDDSPASGS GRHKKKLRLI
101: MGLHDGSAKV QTGISLNTLG SLGYEIDHGW RQRIAVCHSK LGDQPKRSHG
Best Arabidopsis Sequence Match ( AT5G50920.1 )
(BLAST)
001: MAMATRVLAQ STPPSLACYQ RNVPSRGSGR SRRSVKMMCS QLQVSGLRMQ GFMGLRGNNA LDTLGKSRQD FHSKVRQAMN VPKGKASRFT VKAMFERFTE
101: KAIKVIMLAQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DARVEVEKII GRGSGFVAVE IPFTPRAKRV LELSLEEARQ LGHNYIGSEH
201: LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTANVGGGSS SNKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL GRRTKNNPCL
301: IGEPGVGKTA IAEGLAQRIA SGDVPETIEG KKVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR
401: GELQCIGATT LDEYRKHIEK DPALERRFQP VKVPEPTVDE TIQILKGLRE RYEIHHKLRY TDESLVAAAQ LSYQYISDRF LPDKAIDLID EAGSRVRLRH
501: AQVPEEAREL EKELRQITKE KNEAVRGQDF EKAGTLRDRE IELRAEVSAI QAKGKEMSKA ESETGEEGPM VTESDIQHIV SSWTGIPVEK VSTDESDRLL
601: KMEETLHKRI IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG
701: QLTEAVRRRP YTVVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDYDE KDSSYNRIKS LVTEELKQYF
801: RPEFLNRLDE MIVFRQLTKL EVKEIADILL KEVFERLKKK EIELQVTERF KERVVDEGYN PSYGARPLRR AIMRLLEDSM AEKMLAREIK EGDSVIVDVD
901: AEGNVTVLNG GSGTPTTSLE EQEDSLPVA
Arabidopsis Description
CLPC1Chaperone protein ClpC1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FI56]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.