CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029672_P004	Maize	plastid	63.87	32.48
KRH03117	Soybean	cytosol	42.86	11.23
KRH59753	Soybean	endoplasmic reticulum	66.39	8.6
KRH54115	Soybean	plastid	65.55	8.46
KRH63851	Soybean	plastid	65.55	8.46
KRH41069	Soybean	mitochondrion, plastid	64.71	8.38
KRH52355	Soybean	cytosol, mitochondrion	45.38	8.29
KRH54672	Soybean	endoplasmic reticulum	47.06	7.44
KRH63903	Soybean	plastid	53.78	6.77
KRH54048	Soybean	plastid	52.1	6.53
KRH56831	Soybean	endoplasmic reticulum	48.74	6.37
KRH44979	Soybean	nucleus, plastid	51.26	6.26
KRH01254	Soybean	nucleus, plastid	51.26	6.26
KRH18417	Soybean	nucleus	51.26	6.24
KRG93616	Soybean	nucleus	51.26	6.24
KRH61688	Soybean	mitochondrion	48.74	5.95
AT3G45450.1	Thale cress	cytosol	15.13	5.28
KRH63249	Soybean	mitochondrion	4.2	2.58

Protein Annotations

EMBL:ACUP02005367	EnsemblPlants:KRH46928	EnsemblPlantsGene:GLYMA_08G365600	Gene3D:1.10.8.60	Gene3D:3.40.50.300	InterPro:P-loop_NTPase
PANTHER:PTHR43572	PANTHER:PTHR43572:SF21	ProteinID:KRH46928	ProteinID:KRH46928.1	SEG:seg	SUPFAM:SSF52540
UniParc:UPI0006EE0FA4	UniProt:A0A0R0IXJ4	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:47649886..47650531

Molecular Weight (calculated)

13723.7 Da

IEP (calculated)

8.101

GRAVY (calculated)

-0.229

Length

119 amino acids

Sequence
(BLAST)

001: MLKLIYALTV VRNFMQCIGA TTLDEYRKHI EKDPALERRF QPDETIQILK GLRERYEIHH KLRYTDVQLS HLNVLLPFRD RFLSDKAIDL IDEAGRLSSP
101: SSTGTGHCCH LLSLSSLSL

Best Arabidopsis Sequence Match ( AT5G50920.1 )
(BLAST)

001: MAMATRVLAQ STPPSLACYQ RNVPSRGSGR SRRSVKMMCS QLQVSGLRMQ GFMGLRGNNA LDTLGKSRQD FHSKVRQAMN VPKGKASRFT VKAMFERFTE
101: KAIKVIMLAQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DARVEVEKII GRGSGFVAVE IPFTPRAKRV LELSLEEARQ LGHNYIGSEH
201: LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTANVGGGSS SNKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL GRRTKNNPCL
301: IGEPGVGKTA IAEGLAQRIA SGDVPETIEG KKVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR
401: GELQCIGATT LDEYRKHIEK DPALERRFQP VKVPEPTVDE TIQILKGLRE RYEIHHKLRY TDESLVAAAQ LSYQYISDRF LPDKAIDLID EAGSRVRLRH
501: AQVPEEAREL EKELRQITKE KNEAVRGQDF EKAGTLRDRE IELRAEVSAI QAKGKEMSKA ESETGEEGPM VTESDIQHIV SSWTGIPVEK VSTDESDRLL
601: KMEETLHKRI IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG
701: QLTEAVRRRP YTVVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDYDE KDSSYNRIKS LVTEELKQYF
801: RPEFLNRLDE MIVFRQLTKL EVKEIADILL KEVFERLKKK EIELQVTERF KERVVDEGYN PSYGARPLRR AIMRLLEDSM AEKMLAREIK EGDSVIVDVD
901: AEGNVTVLNG GSGTPTTSLE EQEDSLPVA

Arabidopsis Description

CLPC1Chaperone protein ClpC1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FI56]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.