Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G046000.1 | Wheat | cytosol | 97.44 | 97.44 |
| TraesCS5B01G554000.1 | Wheat | cytosol | 61.99 | 71.48 |
| TraesCS7B01G357500.1 | Wheat | cytosol | 70.14 | 71.1 |
| TraesCS5B01G422800.1 | Wheat | cytosol | 71.64 | 71.0 |
| TraesCS7B01G357600.2 | Wheat | cytosol | 70.74 | 69.58 |
| TraesCS5B01G422900.1 | Wheat | cytosol | 65.16 | 69.45 |
| TraesCS7B01G357400.1 | Wheat | cytosol | 67.27 | 66.87 |
| TraesCS2B01G158300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 68.93 | 66.23 |
| TraesCS5B01G423000.1 | Wheat | cytosol | 67.27 | 64.73 |
| TraesCS1B01G315600.1 | Wheat | cytosol | 71.34 | 64.44 |
| TraesCS5B01G537100.1 | Wheat | mitochondrion | 64.4 | 63.26 |
| TraesCS5B01G070000.1 | Wheat | mitochondrion | 43.59 | 60.97 |
| OQU85081 | Sorghum | mitochondrion, plastid | 65.46 | 60.45 |
| KRH63249 | Soybean | mitochondrion | 17.04 | 58.25 |
| OQU81585 | Sorghum | cytosol | 56.41 | 57.89 |
| TraesCS6B01G278000.1 | Wheat | cytosol | 65.31 | 52.74 |
| TraesCS4B01G090300.1 | Wheat | mitochondrion | 52.64 | 44.92 |
| TraesCS3B01G308100.1 | Wheat | cytosol | 55.81 | 40.53 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 55.05 | 39.8 |
| TraesCS4B01G393100.1 | Wheat | cytosol | 53.24 | 39.09 |
| TraesCS4B01G082900.1 | Wheat | mitochondrion | 41.63 | 36.65 |
| TraesCS4B01G380800.1 | Wheat | plastid | 48.11 | 32.72 |
| TraesCS5B01G112500.1 | Wheat | plastid | 44.49 | 32.07 |
| TraesCS6B01G233800.1 | Wheat | plastid | 44.19 | 31.99 |
| TraesCS2B01G304200.1 | Wheat | golgi | 44.19 | 31.95 |
| TraesCS6B01G174500.1 | Wheat | mitochondrion | 46.91 | 31.38 |
| TraesCS4B01G083000.1 | Wheat | plastid | 43.29 | 30.53 |
| TraesCS2B01G307500.1 | Wheat | plastid | 42.53 | 29.87 |
| TraesCS5B01G321800.1 | Wheat | plastid | 41.63 | 29.77 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:ClpA/B |
| InterPro:Clp_ATPase_C | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | PANTHER:PTHR11638 |
| PANTHER:PTHR11638:SF100 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4B01G046000 | EnsemblPlants:TraesCS4B01G046000.1 |
| TIGR:cd00009 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:32970460..32973159
Molecular Weight (calculated)
72943.3 Da
IEP (calculated)
9.112
GRAVY (calculated)
-0.222
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFDRAMARS AACDRLGASV SRPSGNLSSD TKAVLCIGAA AALGWAAWRY YQRRVCLEKF GRDMTALAGK ADPVIGRDDE IDRVISILCR RTKNCVALVG
101: AAGVGKTAVA EALAQRIAAG MVPDVLAGAR VIELDLGELV AGTKYRGSFE RRMKDVIKQV EASNGKVILF IDEMHMLLGA GRSRRSAMGA GNMLKPALAR
201: GRIRCVGATT FDEYRKYVEK DAALERRFQK VQVEEPSMHT TIEILQGLKK RHEQYHGLAI QDAALVAAAQ LAGRYITGRQ FPDKAIDLID EACATANKKM
301: RQINRQKEEM NTTKSSSANA MKKAIITPDH VAQVVSRWTG IPVTALNQEE KDKLICLADR LHERVVGQDE AVNLVADAVL RSRAGLDHPG QPIGSFLFLG
401: STGVGKTELA KALAEQLFDS EKMLVRFDMS EYVGSSSVLR LVGAPPSYRG HEDGGQLTEK VRRNPYSVIL FDEVEKADPS VFNIFLQILD DGRLTDGRGQ
501: TVDFKNTIII MTSNLGSDYL ISKTARENTT ESIRDLLMEQ VCKHFKPELL NRLSEIVIFE PLSHDKLKEI TKIQMKSIMA RVATKGISLS ISDAALDTIL
601: SESYSPTYGA RPIRRWMQKN VMTTLSKMLV KGQASEGSTI CIEATDDKKG LEYEVVKKEA SPH
101: AAGVGKTAVA EALAQRIAAG MVPDVLAGAR VIELDLGELV AGTKYRGSFE RRMKDVIKQV EASNGKVILF IDEMHMLLGA GRSRRSAMGA GNMLKPALAR
201: GRIRCVGATT FDEYRKYVEK DAALERRFQK VQVEEPSMHT TIEILQGLKK RHEQYHGLAI QDAALVAAAQ LAGRYITGRQ FPDKAIDLID EACATANKKM
301: RQINRQKEEM NTTKSSSANA MKKAIITPDH VAQVVSRWTG IPVTALNQEE KDKLICLADR LHERVVGQDE AVNLVADAVL RSRAGLDHPG QPIGSFLFLG
401: STGVGKTELA KALAEQLFDS EKMLVRFDMS EYVGSSSVLR LVGAPPSYRG HEDGGQLTEK VRRNPYSVIL FDEVEKADPS VFNIFLQILD DGRLTDGRGQ
501: TVDFKNTIII MTSNLGSDYL ISKTARENTT ESIRDLLMEQ VCKHFKPELL NRLSEIVIFE PLSHDKLKEI TKIQMKSIMA RVATKGISLS ISDAALDTIL
601: SESYSPTYGA RPIRRWMQKN VMTTLSKMLV KGQASEGSTI CIEATDDKKG LEYEVVKKEA SPH
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.