Factsheet for TraesCS4D01G046000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G046000.1	Wheat	cytosol	97.44	97.44
TraesCS4D01G047000.1	Wheat	cytosol	91.4	90.85
TraesCS3D01G090400.1	Wheat	mitochondrion	64.4	71.89
TraesCS2D01G136900.1	Wheat	cytosol	56.11	71.26
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	71.34	70.91
TraesCS7D01G445400.1	Wheat	cytosol	60.63	70.77
TraesCS5D01G429500.1	Wheat	cytosol	71.04	70.4
Os02t0537400-01	Rice	cytosol	45.4	68.72
TraesCS7D01G445500.1	Wheat	cytosol	36.2	66.85
TraesCS5D01G429600.1	Wheat	mitochondrion	68.63	66.13
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	68.33	65.84
TraesCS5D01G074000.1	Wheat	mitochondrion	67.57	64.65
TraesCS7D01G045400.1	Wheat	cytosol	46.15	62.07
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	57.92	61.74
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	57.92	61.74
TraesCS7D01G046200.1	Wheat	cytosol	48.42	61.49
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	48.11	60.65
TraesCS7D01G042900.1	Wheat	cytosol	58.67	60.5
TraesCS7D01G042800.1	Wheat	plastid	58.52	60.34
OQU85081	Sorghum	mitochondrion, plastid	65.16	60.17
TraesCS5D01G254700.2	Wheat	mitochondrion	37.71	58.96
TraesCS3D01G449000.1	Wheat	cytosol	24.43	58.27
KRH63249	Soybean	mitochondrion	17.04	58.25
OQU81585	Sorghum	cytosol	56.26	57.74
TraesCS3D01G273600.1	Wheat	cytosol	56.26	40.85
TraesCS1D01G342100.1	Wheat	golgi	55.35	39.98
TraesCS6D01G183600.2	Wheat	cytosol, plastid	44.04	31.88
TraesCS5D01G118700.1	Wheat	plastid	44.19	31.85
TraesCS2D01G285800.1	Wheat	plastid	44.04	31.84
TraesCS6D01G135600.1	Wheat	golgi	46.3	30.98
TraesCS4D01G081100.1	Wheat	plastid	43.29	30.53
TraesCS2D01G289100.1	Wheat	plastid	42.84	30.02
TraesCS5D01G328100.1	Wheat	plastid	41.78	29.78

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:Clp_ATPase_C	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	PANTHER:PTHR11638
PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4D01G046000	EnsemblPlants:TraesCS4D01G046000.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:21691863..21697126

Molecular Weight (calculated)

73019.3 Da

IEP (calculated)

8.752

GRAVY (calculated)

-0.206

Length

663 amino acids

Sequence
(BLAST)

001: MDFDRAMARS AACDRLGASV SRSSGNVSSD TKAVLCLGAA AALGWAAWRY YQRHVCLQKF GRDMTALAGK ADPVIGRDDE IDRVISILCR RTKNCVALVG
101: AAGVGKTAVA EALAQRIAAG MVPDVLAGAS VIELDLGELV AGTKYRGSFE RRMKDVIKQV EASNGKVILF IDEMHMLLGA GRSRRSAMGA ANMLKPALAR
201: GRIRCVGATT FDEYRKYVEK DAALERRFQK VQVEEPSMHT TIEILQGLKK WHEKYHGLEI QDAALVAAAQ LAGRYITGRQ FPDKAIDLID EACATANKKM
301: RQINRQKEEM KTTKSSSANA MKEAIITPDH VAQVVSRWTG IPVTVLNQEE KDKLICLADR LHERVVGQDE AVNLVAEAVL RSRAGLDHPG QPIGSFLFLG
401: STGVGKTELA KALAEQLFDS EKMLVRFDMS EYVGSSSVLR LVGAPPSYRG YEDGGQLTEK VRRNPYSVIL FDEVEKADPS VFNIFLQILD DGRLTDGRGQ
501: TVDFKNTIII MTSNLGSDYL ISKTARENTT ESTRDLLMEQ VCKHFKPELL NRLSEIVIFE PLSHDKLKEI TKIQMKSIMA RVATKGISLS ISDAALDTIL
601: SESYSPTYGA RPIRRWMQKN VMTTLSKMLV KGQASEGSTI CIEATDDKKG LEYEVVKKEA SLH

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.