Factsheet for TraesCS2D01G289100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G291100.1	Wheat	plastid	98.94	98.94
TraesCS2B01G307500.1	Wheat	plastid	98.52	98.73
HORVU2Hr1G072020.5	Barley	plastid	85.41	96.88
OQU81478	Sorghum	cytosol	78.12	86.84
Zm00001d003847_P001	Maize	plastid	84.14	85.41
TraesCS5D01G328100.1	Wheat	plastid	74.31	75.59
GSMUA_Achr6P23780_001	Banana	cytosol	62.37	69.82
CDY38846	Canola	plastid	60.25	61.22
CDY32646	Canola	plastid	59.94	60.71
VIT_19s0014g00020.t01	Wine grape	plastid	60.57	60.57
Bra029193.1-P	Field mustard	plastid	60.36	60.55
CDX71686	Canola	plastid	59.51	60.41
AT5G51070.1	Thale cress	plastid	60.15	60.21
GSMUA_Achr10P...	Banana	plastid	62.47	59.64
Solyc03g117950.2.1	Tomato	nucleus	59.83	58.71
PGSC0003DMT400036893	Potato	plastid	59.83	58.65
KRH63903	Soybean	plastid	58.25	58.25
KRH54048	Soybean	plastid	57.82	57.58
TraesCS2D01G285800.1	Wheat	plastid	42.92	44.27
TraesCS6D01G183600.2	Wheat	cytosol, plastid	42.81	44.21
TraesCS5D01G118700.1	Wheat	plastid	42.39	43.59
TraesCS4D01G046000.1	Wheat	cytosol	30.02	42.84
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	23.68	42.59
TraesCS7D01G445400.1	Wheat	cytosol	25.48	42.43
TraesCS3D01G090400.1	Wheat	mitochondrion	26.53	42.26
TraesCS4D01G047000.1	Wheat	cytosol	29.6	41.98
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	27.38	41.64
TraesCS5D01G254700.2	Wheat	mitochondrion	18.6	41.51
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	27.27	41.48
TraesCS4D01G081100.1	Wheat	plastid	41.12	41.38
TraesCS2D01G136900.1	Wheat	cytosol	22.83	41.38
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	28.22	40.03
TraesCS5D01G074000.1	Wheat	mitochondrion	29.28	39.97
TraesCS7D01G045400.1	Wheat	cytosol	20.72	39.76
TraesCS5D01G429500.1	Wheat	cytosol	28.01	39.61
TraesCS7D01G046200.1	Wheat	cytosol	21.78	39.46
TraesCS7D01G042800.1	Wheat	plastid	26.53	39.04
TraesCS7D01G042900.1	Wheat	cytosol	26.53	39.04
TraesCS7D01G445500.1	Wheat	cytosol	14.8	39.0
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	27.27	37.5
TraesCS5D01G429600.1	Wheat	mitochondrion	27.27	37.5
TraesCS1D01G342100.1	Wheat	golgi	35.84	36.93
TraesCS3D01G273600.1	Wheat	cytosol	34.99	36.25
TraesCS3D01G449000.1	Wheat	cytosol	10.47	35.61
TraesCS6D01G135600.1	Wheat	golgi	36.89	35.22

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:19.4.2.9.5	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152
GO:GO:0019538	InterPro:IPR036628	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02861	PFAM:PF07724
PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871	PANTHER:PTHR43572	PANTHER:PTHR43572:SF17
SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	SUPFAM:SSF81923	EnsemblPlantsGene:TraesCS2D01G289100	EnsemblPlants:TraesCS2D01G289100.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:371153556..371158181

Molecular Weight (calculated)

102534.0 Da

IEP (calculated)

8.501

GRAVY (calculated)

-0.134

Length

946 amino acids

Sequence
(BLAST)

001: MEACCCSSSS APPASILATG AGLRRRFSPA AVAAAASGGR AVALALAPPL RASSAALLAA APRRGQQRRG AAGLVVRAVF ERFTERAVKA VVLSQREARG
101: MGDEVVAPHH LLLGLVAEDR SAAGFLASGV RMERAREACR AAVGKGGPAQ AATGLATDVP FSGASKRVFV AAVEFSRNMG CNFISPDHIA LGLFDLDDPT
201: TNSILKSLGV VPTQLAKQAL TRVKGELAKD GREPLGLSSF KLRDKSTAGN GRTAIAKYSN KKKEKSALAQ FCIDLTMRAS GGFIDPVIGR TKEIERVVQI
301: ICRRTKNNPI LLGEAGVGKT AIAEGLALKI ANGDVPIFLV GKRILSLDVA LLMAGAKERG ELEARVTSLI REVRKADDVI LFIDEVHTLI GSGIAGRGNK
401: GAGLDIANLL KPALARGELQ CIASTTLDEH RLHFEKDKAL ARRFQPVYVN EPSQEDAVKI LLGLREKYET YHKCKYTLEG INAAVYLSVR YIPDRHLPDK
501: AIDLIDEAGS RARMESFKKK KEEQCSIILK SPDEYWQEIR AVQAMHEVAL TNRLKYSLNE NDQENEVNVE VLDDSKTSPT TTPSASADEP SVVGLEEIAR
601: VTSLWSGIPV QQLTADERKL LVGLDDELRK RVIGQDDAVV AISRAVKRSR TGMSDPDRPI ATLLFCGPTG VGKTELTKAL ASTYFGSESA MVRLDMSEYM
701: ERHAVSKLIG SPPGYMGFGE GGTLTEAVRR KPFTVVLFDE IEKAHPDIFN ILLQVFEDGH LTDSQGRRVS FKNTLIVMTS NVGSTSISKG TMSMGFQTQN
801: DTEENTYAVI KSLVMEELKA FFRPELLNRM DEVVVFRPLE KTQMLAILNI ILEEVNGRLL ALGIGLVVSD AMKNMISQQG YDKSYGARPL RRAVTQLVED
901: VISEAILSGQ YKPGDTIMMD TDDKGKPCLS RLNDQTVQVS DPTPTL

Best Arabidopsis Sequence Match ( AT5G51070.1 )
(BLAST)

001: MEVLSTSSPL TLHSHRLLSA SSSSSHVTSI AASSLSSFAS SYLGISLSNR TIHRFSTTPT NLRRFPQRKR KKFTPISAVF ERFTERAIRA IIFSQKEAKS
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA

Arabidopsis Description

CLPDChaperone protein ClpD, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42762]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.