Factsheet for TraesCS7D01G045500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	97.91	97.91
TraesCSU01G102400.1	Wheat	endoplasmic reticulum	96.95	96.95
TraesCSU01G102300.1	Wheat	endoplasmic reticulum	96.95	96.95
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	95.66	95.66
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	95.66	95.66
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	94.53	94.53
TraesCS5D01G254700.2	Wheat	mitochondrion	61.58	90.33
TraesCS7D01G045400.1	Wheat	cytosol	66.08	83.37
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	67.36	79.66
TraesCS7D01G046200.1	Wheat	cytosol	56.11	66.86
TraesCS7D01G042800.1	Wheat	plastid	67.36	65.16
TraesCS7D01G042900.1	Wheat	cytosol	66.4	64.23
TraesCS3D01G090400.1	Wheat	mitochondrion	59.65	62.46
TraesCS7D01G445400.1	Wheat	cytosol	56.91	62.32
TraesCS2D01G136900.1	Wheat	cytosol	51.45	61.3
Os02t0537400-01	Rice	cytosol	41.48	58.9
TraesCS4D01G046000.1	Wheat	cytosol	61.74	57.92
TraesCS5D01G429500.1	Wheat	cytosol	62.22	57.85
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	61.9	57.72
TraesCS5D01G074000.1	Wheat	mitochondrion	63.83	57.29
TraesCS4D01G047000.1	Wheat	cytosol	61.09	56.97
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	62.06	56.1
TraesCS5D01G429600.1	Wheat	mitochondrion	61.74	55.81
TraesCS7D01G445500.1	Wheat	cytosol	31.19	54.04
KRH63249	Soybean	mitochondrion	16.56	53.09
OQU85081	Sorghum	mitochondrion, plastid	59.65	51.67
TraesCS3D01G449000.1	Wheat	cytosol	22.83	51.08
OQU81585	Sorghum	cytosol	51.29	49.38
TraesCS3D01G273600.1	Wheat	cytosol	53.7	36.58
TraesCS1D01G342100.1	Wheat	golgi	53.22	36.06
TraesCS6D01G183600.2	Wheat	cytosol, plastid	42.93	29.15
TraesCS2D01G285800.1	Wheat	plastid	42.93	29.12
TraesCS5D01G118700.1	Wheat	plastid	42.6	28.8
TraesCS6D01G135600.1	Wheat	golgi	45.02	28.25
TraesCS4D01G081100.1	Wheat	plastid	42.44	28.09
TraesCS5D01G328100.1	Wheat	plastid	41.8	27.96
TraesCS2D01G289100.1	Wheat	plastid	41.48	27.27

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS7D01G045500	EnsemblPlants:TraesCS7D01G045500.1	TIGR:cd00009	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:+:22943915..22946238

Molecular Weight (calculated)

68602.2 Da

IEP (calculated)

7.442

GRAVY (calculated)

-0.088

Length

622 amino acids

Sequence
(BLAST)

001: MEQAMLARVL AVTSVGLSWA IVWSLLSQEL KPFSTPAILR TLDAGRLDPV IGHDDDIDRI ICILCRRTKN CAALVGPAGV GKTAIVEGLA RRIAAGTVPE
101: ALVGARVAEL DVGAMVAGTH WRGMFEQRLK DAIKKAEDSA GKLILFIDEM HMIVGAGDHR GGTGDAANIL KPALARGRIR CIGATTTEEY RKYIQRDAAL
201: ERRFQRVDVD EPTVQATVAI LQGLKQRYQD YHGLIISDDA LVAAAHLAGH YITGRQFPDK AIDLMDEACT SVRLHQPKQI RDKKTSTVNA VQELTVGPCH
301: IAQVVSRWTK IPITTLGREE EKFSHLVDRL HERVVGQHEA INLVAQEVLR SRVGFDQSSQ PIGSFLFLGP TGVGKTELAK ALAEKLFDNE KMLVRFDMSE
401: YADSGSVSRL IGGPRSYEED GQLTDKVRSQ PYSVVLFDEA DKAHPSIFKV LIQLLDDGVL IDGKGRSVYF KNTIIIMSSN LGAENLSAGM AAENMETARD
501: LLMEKVEKRF KPEFINKLSE TVIFEPLSHD ELREIVKIQM KSVVAMAANK GISLFASDAA LDVIWSELHD MVYGARPIKR WMKKNVTRVL VDMLVNGEAC
601: QGSTVFIDAA NDRKGLKYHV LK

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.