Factsheet for TraesCS4A01G436900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	95.66	95.66
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	95.18	95.18
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	94.69	94.69
TraesCSU01G102400.1	Wheat	endoplasmic reticulum	94.53	94.53
TraesCSU01G102300.1	Wheat	endoplasmic reticulum	94.53	94.53
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	94.53	94.53
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	90.19	93.81
TraesCS5A01G046800.1	Wheat	cytosol	66.88	84.9
TraesCS7A01G048300.1	Wheat	cytosol	66.88	69.1
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	69.29	67.98
TraesCS7A01G048400.1	Wheat	cytosol	67.85	65.63
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	69.45	65.06
TraesCS7A01G456700.1	Wheat	mitochondrion	49.2	64.69
TraesCS7A01G050700.1	Wheat	extracellular	68.97	64.61
TraesCS4A01G443200.1	Wheat	cytosol	66.56	64.39
TraesCS4A01G443300.1	Wheat	plastid	66.4	64.23
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	59.0	62.1
TraesCS3A01G090400.1	Wheat	cytosol	50.96	61.2
TraesCS4A01G324200.1	Wheat	cytosol	10.29	59.26
TraesCS3A01G106800.1	Wheat	cytosol	59.81	58.77
Os02t0537400-01	Rice	cytosol	40.84	57.99
TraesCS3A01G124200.1	Wheat	mitochondrion	53.38	57.74
TraesCS4A01G324100.1	Wheat	cytosol	58.68	57.21
TraesCS4A01G267200.1	Wheat	cytosol, plastid	61.41	56.93
TraesCS5A01G062800.1	Wheat	mitochondrion	63.5	56.92
TraesCS1A01G304800.1	Wheat	cytosol	60.77	55.67
OQU85081	Sorghum	mitochondrion, plastid	59.16	51.25
KRH63249	Soybean	mitochondrion	15.92	51.03
OQU81585	Sorghum	cytosol	50.96	49.07
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	50.8	40.88
TraesCS3A01G274400.1	Wheat	cytosol	53.05	36.14
TraesCS1A01G340100.1	Wheat	nucleus	52.73	35.73
TraesCS5A01G547300.1	Wheat	golgi, plastid	45.82	29.26
TraesCS6A01G195200.1	Wheat	plastid	42.28	28.71
TraesCS5A01G118900.1	Wheat	unclear	41.96	28.37
TraesCS2A01G287300.2	Wheat	plastid	40.51	28.16
TraesCS5A01G321300.1	Wheat	plastid	41.48	27.86
TraesCS6A01G146400.1	Wheat	mitochondrion	44.37	27.85
TraesCS4A01G232800.1	Wheat	plastid	41.96	27.83
TraesCS2A01G291100.1	Wheat	plastid	41.32	27.17
TraesCS4A01G232900.1	Wheat	cytosol	5.95	26.81

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G436900
EnsemblPlants:TraesCS4A01G436900.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:706706670..706709376

Molecular Weight (calculated)

68462.8 Da

IEP (calculated)

8.077

GRAVY (calculated)

-0.135

Length

622 amino acids

Sequence
(BLAST)

001: MEQAMLARVL AVTSVGLSWA VVWSLLSQQL KPFSTPAILR TLDAAASDPV TGRDDDIDRV ICILCRRTKN CAALVGPAGV GKTAIVEGLA RRIAAGAVPE
101: ALAGARVAEL DVGAMVAGTH WRGMFEQRLK DAIKKAEDSA GKLILFIDEM HMIVGAGDQR GGTGDAANIL KPALARGRIR CIGATTTEEY RKYIQKDAAL
201: ERRFQRVDVN EPTVQATVAI LQGLKQRYQD YHGLTIRDDA LVVAAHLAGR YITGRQFPDK AIDLMDEACT SLKLHQPKQI RDKKTSTVNA VEELTVGPCH
301: IAQVVSRWTK IPIATLGREE EKFSHLVDRL HERVVGQHEA VNLVVQEVLR SRVGFDQSSQ PIGSFLFLGP TGVGKTELAK ALAEKLFDNE KMLVRFDMSE
401: YADSGSVQRL IGGSRSYEED GQLTDKVRSQ PYSVVLFDEA DKTHPSIFKV LIQLLDDGVL IDGKGRSVYF KNTIIIMSSN LGAENLSAGM AAENMETARD
501: LLMEKVEKRF KPEYINKLSE TVIFEPLSHD ELREIVKIQM KSVVAMAANK GISLFASDAA LDLIWSESHD TVYGARPIKR WMKKNVTRVL VDKLVNGEAC
601: QGSTVSIDAV DDRKGLKYHV LK

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.