Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G342100.1 | Wheat | golgi | 98.58 | 98.58 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 98.47 | 98.58 |
| HORVU1Hr1G076190.4 | Barley | nucleus | 98.26 | 98.47 |
| Os05t0519700-01 | Rice | nucleus | 93.68 | 94.3 |
| EES19828 | Sorghum | nucleus | 93.14 | 93.65 |
| Zm00001d038806_P001 | Maize | nucleus | 92.48 | 93.09 |
| TraesCS3A01G274400.1 | Wheat | cytosol | 90.85 | 91.35 |
| GSMUA_Achr1P13710_001 | Banana | cytosol | 80.61 | 86.96 |
| GSMUA_Achr3P16240_001 | Banana | cytosol | 79.08 | 85.21 |
| CDX96531 | Canola | cytosol | 68.19 | 84.25 |
| CDX73074 | Canola | cytosol | 68.08 | 84.12 |
| KRH54672 | Soybean | endoplasmic reticulum | 68.95 | 84.06 |
| VIT_17s0000g07190.t01 | Wine grape | nucleus | 83.22 | 83.86 |
| Bra015922.1-P | Field mustard | nucleus | 82.79 | 83.42 |
| CDX85823 | Canola | nucleus | 79.85 | 83.01 |
| AT1G74310.1 | Thale cress | nucleus | 82.03 | 82.66 |
| KRH56831 | Soybean | endoplasmic reticulum | 81.92 | 82.55 |
| Bra003807.1-P | Field mustard | nucleus | 78.65 | 81.86 |
| CDX68190 | Canola | nucleus | 72.55 | 81.72 |
| Solyc03g115230.2.1 | Tomato | plastid | 80.17 | 80.79 |
| PGSC0003DMT400063352 | Potato | nucleus | 79.85 | 80.37 |
| Solyc06g082560.1.1 | Tomato | plastid | 72.77 | 78.22 |
| AT4G14670.1 | Thale cress | cytosol | 46.3 | 68.22 |
| TraesCS4A01G324200.1 | Wheat | cytosol | 7.08 | 60.19 |
| TraesCS7A01G456700.1 | Wheat | mitochondrion | 30.39 | 58.99 |
| TraesCS3A01G090400.1 | Wheat | cytosol | 31.7 | 56.18 |
| TraesCS5A01G046800.1 | Wheat | cytosol | 29.63 | 55.51 |
| TraesCS4A01G267200.1 | Wheat | cytosol, plastid | 39.98 | 54.69 |
| TraesCS7A01G048300.1 | Wheat | cytosol | 35.84 | 54.65 |
| TraesCS4A01G324100.1 | Wheat | cytosol | 37.91 | 54.55 |
| TraesCS1A01G304800.1 | Wheat | cytosol | 40.2 | 54.34 |
| TraesCS3A01G124200.1 | Wheat | mitochondrion | 33.88 | 54.09 |
| TraesCS7A01G048500.1 | Wheat | endoplasmic reticulum | 37.25 | 53.94 |
| TraesCS7A01G050300.1 | Wheat | endoplasmic reticulum | 36.38 | 53.7 |
| TraesCS3A01G106800.1 | Wheat | cytosol | 36.93 | 53.55 |
| TraesCS7A01G050400.1 | Wheat | endoplasmic reticulum | 36.06 | 53.22 |
| TraesCS7A01G048400.1 | Wheat | cytosol | 37.04 | 52.88 |
| TraesCS4A01G436900.1 | Wheat | endoplasmic reticulum | 35.73 | 52.73 |
| TraesCS4A01G437000.1 | Wheat | endoplasmic reticulum, mitochondrion | 34.31 | 52.68 |
| TraesCS4A01G436600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 37.69 | 52.11 |
| TraesCS5A01G062800.1 | Wheat | mitochondrion | 39.22 | 51.87 |
| TraesCS4A01G443200.1 | Wheat | cytosol | 36.17 | 51.63 |
| TraesCS4A01G443300.1 | Wheat | plastid | 35.95 | 51.32 |
| TraesCS7A01G050700.1 | Wheat | extracellular | 37.04 | 51.2 |
| TraesCS4A01G226000.1 | Wheat | mitochondrion, plastid | 41.61 | 49.42 |
| TraesCS7A01G050600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 30.83 | 47.88 |
| AT4G14675.1 | Thale cress | cytosol | 7.95 | 45.91 |
| TraesCS5A01G547300.1 | Wheat | golgi, plastid | 47.71 | 44.97 |
| TraesCS6A01G146400.1 | Wheat | mitochondrion | 46.19 | 42.79 |
| TraesCS5A01G118900.1 | Wheat | unclear | 38.02 | 37.93 |
| TraesCS6A01G195200.1 | Wheat | plastid | 37.47 | 37.55 |
| TraesCS4A01G232800.1 | Wheat | plastid | 37.91 | 37.1 |
| TraesCS2A01G287300.2 | Wheat | plastid | 36.17 | 37.09 |
| TraesCS5A01G321300.1 | Wheat | plastid | 35.84 | 35.53 |
| TraesCS2A01G291100.1 | Wheat | plastid | 36.6 | 35.52 |
| TraesCS4A01G232900.1 | Wheat | cytosol | 4.79 | 31.88 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:26.4.2.3 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core |
| InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | InterPro:Clp_N | InterPro:Clp_N_dom_sf |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0034605 |
| InterPro:IPR036628 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 |
| PRINTS:PR00300 | ScanProsite:PS00870 | ScanProsite:PS00871 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF146 | SMART:SM00382 |
| SMART:SM01086 | SUPFAM:SSF52540 | SUPFAM:SSF81923 | EnsemblPlantsGene:TraesCS1A01G340100 | EnsemblPlants:TraesCS1A01G340100.1 | TIGR:cd00009 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:530257362..530260422
Molecular Weight (calculated)
101062.0 Da
IEP (calculated)
6.039
GRAVY (calculated)
-0.317
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPDNFTHKT NEALVAAHEA ASEAGHAQIT PLHLAAALAA DKSGILRQAV AGASGGNASA GDSFERVLAG ALRKLPSQSP PPDSVPASTA LIKAIRRAQS
101: AQKKRGDSHL AVDQLLMGLL EDAQIADCLK EAGVSASRVR AELDKLRGGD NSRKVESASG DTTFQALKTY GRDLVEVAGK LDPVIGRDEE IRRVVRILSR
201: RTKNNPVLIG EPGVGKTAVV EGLAQRVVRG DVPSNLLDVR LVALDMGALV AGAKYRGEFE ERLKAVLKEV EEADGKVILF IDEIHLVLGA GRTEGSMDAA
301: NLFKPMLARG QLRCIGATTL EEYRKYVEKD AAFERRFQQV YVAEPSVADT ISILRGLKEK YEGHHGVRIQ DRAIVVAAQL SARYIMGRHL PDKAIDLVDE
401: ACANVRVQLD SQPEEIDNLE RKRIQLEVEL HALEKEKDKA SKARLVEVRK ELDDLRDKLQ PLTMKYRKEK ERIDEIRKLK QRREELQFTL QEAERRMDLA
501: RVADLKYGAL QEIDVAIAKL EGETGENLML TETVGPEQIA EVVSRWTGIP VTRLGQNDKE RLVGMADRLH TRVVGQTEAV NAVAEAVLRS RAGLGRPQQP
601: TGSFLFLGPT GVGKTELAKA LAEQLFDDEN LLVRIDMSEY MEQHSVARLI GAPPGYVGHE EGGQLTEQVR RRPYSVILFD EVEKAHVAVF NTLLQVLDDG
701: RLTDGQGRTV DFRNTVIIMT SNLGAEHLLA GMVGKNSMKV ARDLVMQEVR RHFRPELLNR LDEMVIFDPL SHEQLRKVAR LQMKDVAVRL AERGVALAVT
801: DAALDVILSL AYDPVYGARP IRRWIEKRVV TQLSKMLIQE EIDENCTVYI DAADKDELAY RVDRSGGLVN AETGQRSDIL IQVPNGALGG GGGGEAAKAV
901: KKMRVMEDGD EDGMDEDA
101: AQKKRGDSHL AVDQLLMGLL EDAQIADCLK EAGVSASRVR AELDKLRGGD NSRKVESASG DTTFQALKTY GRDLVEVAGK LDPVIGRDEE IRRVVRILSR
201: RTKNNPVLIG EPGVGKTAVV EGLAQRVVRG DVPSNLLDVR LVALDMGALV AGAKYRGEFE ERLKAVLKEV EEADGKVILF IDEIHLVLGA GRTEGSMDAA
301: NLFKPMLARG QLRCIGATTL EEYRKYVEKD AAFERRFQQV YVAEPSVADT ISILRGLKEK YEGHHGVRIQ DRAIVVAAQL SARYIMGRHL PDKAIDLVDE
401: ACANVRVQLD SQPEEIDNLE RKRIQLEVEL HALEKEKDKA SKARLVEVRK ELDDLRDKLQ PLTMKYRKEK ERIDEIRKLK QRREELQFTL QEAERRMDLA
501: RVADLKYGAL QEIDVAIAKL EGETGENLML TETVGPEQIA EVVSRWTGIP VTRLGQNDKE RLVGMADRLH TRVVGQTEAV NAVAEAVLRS RAGLGRPQQP
601: TGSFLFLGPT GVGKTELAKA LAEQLFDDEN LLVRIDMSEY MEQHSVARLI GAPPGYVGHE EGGQLTEQVR RRPYSVILFD EVEKAHVAVF NTLLQVLDDG
701: RLTDGQGRTV DFRNTVIIMT SNLGAEHLLA GMVGKNSMKV ARDLVMQEVR RHFRPELLNR LDEMVIFDPL SHEQLRKVAR LQMKDVAVRL AERGVALAVT
801: DAALDVILSL AYDPVYGARP IRRWIEKRVV TQLSKMLIQE EIDENCTVYI DAADKDELAY RVDRSGGLVN AETGQRSDIL IQVPNGALGG GGGGEAAKAV
901: KKMRVMEDGD EDGMDEDA
001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
Arabidopsis Description
CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.