Factsheet for TraesCS5A01G046800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	82.45	67.56
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	85.51	67.36
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	85.31	67.2
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	84.9	66.88
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	70.82	65.97
TraesCS7A01G456700.1	Wheat	mitochondrion	60.41	62.58
TraesCS3A01G090400.1	Wheat	cytosol	61.63	58.3
TraesCS4A01G324200.1	Wheat	cytosol	12.65	57.41
Os02t0537400-01	Rice	cytosol	50.82	56.85
TraesCS7A01G048300.1	Wheat	cytosol	68.78	55.98
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	69.39	53.63
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	71.63	52.86
TraesCS7A01G050700.1	Wheat	extracellular	71.43	52.71
TraesCS7A01G048400.1	Wheat	cytosol	68.16	51.94
TraesCS4A01G443200.1	Wheat	cytosol	67.55	51.48
TraesCS4A01G443300.1	Wheat	plastid	67.35	51.32
TraesCS3A01G106800.1	Wheat	cytosol	63.27	48.97
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	58.37	48.39
KRH63249	Soybean	mitochondrion	18.98	47.94
TraesCS4A01G267200.1	Wheat	cytosol, plastid	65.31	47.69
TraesCS4A01G324100.1	Wheat	cytosol	60.61	46.55
TraesCS5A01G062800.1	Wheat	mitochondrion	65.31	46.11
TraesCS3A01G124200.1	Wheat	mitochondrion	54.08	46.09
TraesCS1A01G304800.1	Wheat	cytosol	63.47	45.8
OQU85081	Sorghum	mitochondrion, plastid	61.63	42.06
OQU81585	Sorghum	cytosol	54.69	41.49
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	51.84	32.86
TraesCS3A01G274400.1	Wheat	cytosol	56.53	30.34
TraesCS1A01G340100.1	Wheat	nucleus	55.51	29.63
TraesCS4A01G232900.1	Wheat	cytosol	7.55	26.81
TraesCS5A01G547300.1	Wheat	golgi, plastid	44.9	22.59
TraesCS6A01G195200.1	Wheat	plastid	41.63	22.27
TraesCS5A01G118900.1	Wheat	unclear	41.43	22.07
TraesCS2A01G287300.2	Wheat	plastid	40.0	21.9
TraesCS6A01G146400.1	Wheat	mitochondrion	43.88	21.7
TraesCS4A01G232800.1	Wheat	plastid	40.82	21.32
TraesCS5A01G321300.1	Wheat	plastid	40.0	21.17
TraesCS2A01G291100.1	Wheat	plastid	40.82	21.14

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	PANTHER:PTHR11638
PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5A01G046800	EnsemblPlants:TraesCS5A01G046800.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:41954111..41969012

Molecular Weight (calculated)

54579.0 Da

IEP (calculated)

8.212

GRAVY (calculated)

-0.222

Length

490 amino acids

Sequence
(BLAST)

001: MFEQRLKDAI KLVEDARGKL ILFIDEMHMI VGAGDRDGTG DAANILKPAL ARGRIRCIGA TTSEEYRRYI QKDAALDRRF QRVDVEEPSV PATVAILQGL
101: KHRYQDHHGL TIRDDALAAA AQLAGRYITG RQFPDKAIDL MDEACTTVKL HKQKEVQNKD TNTINAPEEL TVGPCHIAQV VSRWTKIPIT TLGREEEKLS
201: HLADRLHERI VGQYEAVNLV AQEVLRSRVG FDQSGQPIGS FLFLGPAGVG KTELAKALAD KLFDNEKALV RFDMSEYADS GSVLRLIGGP RRFSLYTQKV
301: RRQPYSVVLF DEVDKAHPSI FKVLIQLLDD GTLIDGKDRN VYFKDTIIIM SSNLGAENLS AGTAGENIAT ARDLLMKQVE KRLKPDFINK LSEIVIFEAL
401: SHDELREIVK IQMKSVVAMA AKKGISLFAT DAALDIIWSE SHDTVYGARP IKRWMKKNVT RVLVDMLVNG EACQGSIICI NATDDKKGLK

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.