Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G324200.1 | Wheat | cytosol | 21.74 | 27.78 |
| TraesCS2A01G287300.2 | Wheat | plastid | 58.7 | 9.05 |
| TraesCS5A01G118900.1 | Wheat | unclear | 60.14 | 9.02 |
| TraesCS4A01G232800.1 | Wheat | plastid | 60.87 | 8.96 |
| TraesCS3A01G090400.1 | Wheat | cytosol | 33.33 | 8.88 |
| TraesCS6A01G195200.1 | Wheat | plastid | 58.7 | 8.84 |
| TraesCS7A01G456700.1 | Wheat | mitochondrion | 26.09 | 7.61 |
| TraesCS5A01G046800.1 | Wheat | cytosol | 26.81 | 7.55 |
| TraesCS7A01G048300.1 | Wheat | cytosol | 30.43 | 6.98 |
| TraesCS4A01G437000.1 | Wheat | endoplasmic reticulum, mitochondrion | 28.99 | 6.69 |
| TraesCS7A01G050400.1 | Wheat | endoplasmic reticulum | 28.99 | 6.43 |
| TraesCS7A01G050300.1 | Wheat | endoplasmic reticulum | 28.99 | 6.43 |
| TraesCS3A01G106800.1 | Wheat | cytosol | 28.99 | 6.32 |
| TraesCS5A01G321300.1 | Wheat | plastid | 42.03 | 6.26 |
| TraesCS7A01G050600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 26.81 | 6.26 |
| TraesCS5A01G062800.1 | Wheat | mitochondrion | 31.16 | 6.2 |
| TraesCS1A01G304800.1 | Wheat | cytosol | 30.43 | 6.19 |
| TraesCS7A01G048500.1 | Wheat | endoplasmic reticulum | 28.26 | 6.15 |
| TraesCS4A01G267200.1 | Wheat | cytosol, plastid | 29.71 | 6.11 |
| TraesCS3A01G124200.1 | Wheat | mitochondrion | 25.36 | 6.09 |
| TraesCS4A01G436900.1 | Wheat | endoplasmic reticulum | 26.81 | 5.95 |
| TraesCS2A01G291100.1 | Wheat | plastid | 40.58 | 5.92 |
| TraesCS7A01G048400.1 | Wheat | cytosol | 27.54 | 5.91 |
| TraesCS4A01G436600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 28.26 | 5.87 |
| TraesCS7A01G050700.1 | Wheat | extracellular | 28.26 | 5.87 |
| TraesCS4A01G443200.1 | Wheat | cytosol | 26.81 | 5.75 |
| TraesCS4A01G443300.1 | Wheat | plastid | 26.81 | 5.75 |
| TraesCS4A01G324100.1 | Wheat | cytosol | 24.64 | 5.33 |
| TraesCS4A01G226000.1 | Wheat | mitochondrion, plastid | 28.26 | 5.05 |
| TraesCS5A01G547300.1 | Wheat | golgi, plastid | 34.78 | 4.93 |
| TraesCS6A01G146400.1 | Wheat | mitochondrion | 34.78 | 4.84 |
| TraesCS3A01G274400.1 | Wheat | cytosol | 31.88 | 4.82 |
| TraesCS1A01G340100.1 | Wheat | nucleus | 31.88 | 4.79 |
| HORVU1Hr1G076100.1 | Barley | cytosol | 2.17 | 1.84 |
| Zm00001d036813_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G232900.1 | EnsemblPlantsGene:TraesCS4A01G232900 | Gene3D:1.10.8.60 | InterPro:Clp_ATPase_C | InterPro:P-loop_NTPase | PANTHER:PTHR43572 |
| PANTHER:PTHR43572:SF21 | PFAM:PF10431 | SMART:SM01086 | SUPFAM:SSF52540 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4A:-:542039991..542040407
Molecular Weight (calculated)
15831.2 Da
IEP (calculated)
5.151
GRAVY (calculated)
-0.610
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSNAGSGEM TGVMVEKDMR EKHGFPPEFL NRLDEVIVFR ELTRPEMKEI ASKMLEEVVR RMREKGMELR VTERFKEVMA EEGYDRSYGA RPLRRAITRL
101: LEDKLVDMML AGEAKEGDSL TVDVDPEGNV VVHNRRAG
101: LEDKLVDMML AGEAKEGDSL TVDVDPEGNV VVHNRRAG
001: MAMATRVLAQ STPPSLACYQ RNVPSRGSGR SRRSVKMMCS QLQVSGLRMQ GFMGLRGNNA LDTLGKSRQD FHSKVRQAMN VPKGKASRFT VKAMFERFTE
101: KAIKVIMLAQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DARVEVEKII GRGSGFVAVE IPFTPRAKRV LELSLEEARQ LGHNYIGSEH
201: LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTANVGGGSS SNKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL GRRTKNNPCL
301: IGEPGVGKTA IAEGLAQRIA SGDVPETIEG KKVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR
401: GELQCIGATT LDEYRKHIEK DPALERRFQP VKVPEPTVDE TIQILKGLRE RYEIHHKLRY TDESLVAAAQ LSYQYISDRF LPDKAIDLID EAGSRVRLRH
501: AQVPEEAREL EKELRQITKE KNEAVRGQDF EKAGTLRDRE IELRAEVSAI QAKGKEMSKA ESETGEEGPM VTESDIQHIV SSWTGIPVEK VSTDESDRLL
601: KMEETLHKRI IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG
701: QLTEAVRRRP YTVVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDYDE KDSSYNRIKS LVTEELKQYF
801: RPEFLNRLDE MIVFRQLTKL EVKEIADILL KEVFERLKKK EIELQVTERF KERVVDEGYN PSYGARPLRR AIMRLLEDSM AEKMLAREIK EGDSVIVDVD
901: AEGNVTVLNG GSGTPTTSLE EQEDSLPVA
101: KAIKVIMLAQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DARVEVEKII GRGSGFVAVE IPFTPRAKRV LELSLEEARQ LGHNYIGSEH
201: LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTANVGGGSS SNKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL GRRTKNNPCL
301: IGEPGVGKTA IAEGLAQRIA SGDVPETIEG KKVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR
401: GELQCIGATT LDEYRKHIEK DPALERRFQP VKVPEPTVDE TIQILKGLRE RYEIHHKLRY TDESLVAAAQ LSYQYISDRF LPDKAIDLID EAGSRVRLRH
501: AQVPEEAREL EKELRQITKE KNEAVRGQDF EKAGTLRDRE IELRAEVSAI QAKGKEMSKA ESETGEEGPM VTESDIQHIV SSWTGIPVEK VSTDESDRLL
601: KMEETLHKRI IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG
701: QLTEAVRRRP YTVVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDYDE KDSSYNRIKS LVTEELKQYF
801: RPEFLNRLDE MIVFRQLTKL EVKEIADILL KEVFERLKKK EIELQVTERF KERVVDEGYN PSYGARPLRR AIMRLLEDSM AEKMLAREIK EGDSVIVDVD
901: AEGNVTVLNG GSGTPTTSLE EQEDSLPVA
Arabidopsis Description
CLPC1Chaperone protein ClpC1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FI56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.