Factsheet for TraesCS3A01G090400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G090400.1	Wheat	mitochondrion	95.37	83.17
TraesCS7A01G456700.1	Wheat	mitochondrion	67.76	74.21
TraesCS4A01G324200.1	Wheat	cytosol	14.29	68.52
Os02t0537400-01	Rice	cytosol	56.76	67.12
TraesCS5A01G046800.1	Wheat	cytosol	58.3	61.63
KRH63249	Soybean	mitochondrion	21.43	57.22
TraesCS4A01G267200.1	Wheat	cytosol, plastid	70.85	54.69
TraesCS1A01G304800.1	Wheat	cytosol	71.62	54.64
TraesCS4A01G324100.1	Wheat	cytosol	65.44	53.13
TraesCS3A01G106800.1	Wheat	cytosol	64.48	52.76
TraesCS7A01G048300.1	Wheat	cytosol	60.62	52.16
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	59.65	51.67
TraesCS3A01G124200.1	Wheat	mitochondrion	56.95	51.3
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	61.58	51.29
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	61.2	50.96
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	61.2	50.96
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	61.58	50.32
TraesCS5A01G062800.1	Wheat	mitochondrion	67.37	50.29
TraesCS7A01G050700.1	Wheat	extracellular	62.93	49.1
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	62.74	48.95
TraesCS7A01G048400.1	Wheat	cytosol	59.27	47.74
TraesCS4A01G443200.1	Wheat	cytosol	59.07	47.59
TraesCS4A01G443300.1	Wheat	plastid	59.07	47.59
OQU85081	Sorghum	mitochondrion, plastid	65.83	47.49
OQU81585	Sorghum	cytosol	59.07	47.37
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	49.81	43.65
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	53.67	35.96
TraesCS4A01G232900.1	Wheat	cytosol	8.88	33.33
TraesCS3A01G274400.1	Wheat	cytosol	56.56	32.09
TraesCS1A01G340100.1	Wheat	nucleus	56.18	31.7
TraesCS6A01G195200.1	Wheat	plastid	44.02	24.89
TraesCS5A01G118900.1	Wheat	unclear	43.82	24.67
TraesCS5A01G547300.1	Wheat	golgi, plastid	46.14	24.54
TraesCS6A01G146400.1	Wheat	mitochondrion	46.14	24.12
TraesCS2A01G287300.2	Wheat	plastid	41.31	23.91
TraesCS4A01G232800.1	Wheat	plastid	42.86	23.67
TraesCS2A01G291100.1	Wheat	plastid	40.15	21.99
TraesCS5A01G321300.1	Wheat	plastid	39.0	21.81

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382
SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3A01G090400	EnsemblPlants:TraesCS3A01G090400.1	TIGR:cd00009	SEG:seg

Description

No Description!

Coordinates

chr3A:+:57514756..57517492

Molecular Weight (calculated)

57074.4 Da

IEP (calculated)

7.083

GRAVY (calculated)

-0.094

Length

518 amino acids

Sequence
(BLAST)

001: MFESRLKTMI KKAENSGGNI ILFIDEMHML IGAGDKWGSN DAANIVKPAL ARSCIRCVGA TTFDDYRKYI EKDAALERRF QKVHIEEPST QATIATLRGI
101: KQQYERHHSL EIQDAAIVAA AELAGRYITG RQFPCKAIDL IDAACATAKK MMQIDSQEKE EDTVKKAIVA PNHVAQAVRR CTGIPVSTLD QEEKDRLIHL
201: ADRLHERVVG QDEAVNLVAE AVLRSRASRD QPGQPIGSFL FLGLTGVGKT DLAKALAEQL FDSEKMLVRI DMSEYVGFGA VARLIGAAPS CIAYDDGGQL
301: TEIVRRRPYS VILFDEVEKA DPLVLNVFIQ LLDDGVLTDG KGRTVDFKNT IIIMTSNLGA EHLTAGMAGE STMEAAKELV IKKVHKHFKP EFLNRLSEVV
401: IFEPLLHDKL KEIVKIQMKS VTARVAAKSI SLSASDAALD VILLESCNLM YGARPIRRWV QKNVMTVLSR MLLKGEAVEG STIVIDATDD KTGLKYEVLN
501: PQGKSPVVEL SCDKTKVT

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.