Factsheet for TraesCS4A01G267200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G047000.1	Wheat	cytosol	93.74	94.3
TraesCS7A01G456700.1	Wheat	mitochondrion	53.35	75.69
TraesCS3A01G090400.1	Wheat	cytosol	54.69	70.85
Os02t0537400-01	Rice	cytosol	45.31	69.41
TraesCS1A01G304800.1	Wheat	cytosol	69.6	68.78
TraesCS3A01G106800.1	Wheat	cytosol	64.68	68.56
TraesCS4A01G324100.1	Wheat	cytosol	62.15	65.36
TraesCS5A01G046800.1	Wheat	cytosol	47.69	65.31
TraesCS4A01G324200.1	Wheat	cytosol	10.43	64.81
TraesCS5A01G062800.1	Wheat	mitochondrion	66.92	64.7
TraesCS3A01G124200.1	Wheat	mitochondrion	55.44	64.7
TraesCS7A01G048300.1	Wheat	cytosol	57.23	63.79
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	59.17	62.62
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	57.38	61.9
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	61.1	61.75
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	57.08	61.58
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	56.93	61.41
TraesCS7A01G050700.1	Wheat	extracellular	60.36	60.99
TraesCS7A01G048400.1	Wheat	cytosol	58.42	60.96
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	54.1	60.7
OQU85081	Sorghum	mitochondrion, plastid	64.68	60.45
TraesCS4A01G443200.1	Wheat	cytosol	57.23	59.72
TraesCS4A01G443300.1	Wheat	plastid	57.08	59.56
OQU81585	Sorghum	cytosol	56.48	58.67
KRH63249	Soybean	mitochondrion	16.69	57.73
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	50.37	57.19
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	53.65	46.57
TraesCS3A01G274400.1	Wheat	cytosol	55.59	40.85
TraesCS1A01G340100.1	Wheat	nucleus	54.69	39.98
TraesCS5A01G547300.1	Wheat	golgi, plastid	47.24	32.55
TraesCS6A01G195200.1	Wheat	plastid	44.26	32.42
TraesCS5A01G118900.1	Wheat	unclear	44.41	32.39
TraesCS2A01G287300.2	Wheat	plastid	41.88	31.4
TraesCS6A01G146400.1	Wheat	mitochondrion	45.6	30.88
TraesCS4A01G232800.1	Wheat	plastid	43.07	30.81
TraesCS2A01G291100.1	Wheat	plastid	42.62	30.23
TraesCS5A01G321300.1	Wheat	plastid	41.58	30.13
TraesCS4A01G232900.1	Wheat	cytosol	6.11	29.71

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G267200
EnsemblPlants:TraesCS4A01G267200.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:579526333..579529059

Molecular Weight (calculated)

73752.2 Da

IEP (calculated)

9.671

GRAVY (calculated)

-0.236

Length

671 amino acids

Sequence
(BLAST)

001: MDFDRAMASM ARSAAFDRSG ASVPRSGGNL SSDTKAVLCL GAAAAVGSAA WRYYQRRACL LKFGRDMTAS AGKTDPVIGR DDEIDRVVSI LCRRTKNCVA
101: LVGAAGVGKT AVAEALAQRI AARMVPDVLA GARVIELDVG ALVAGTKWRG SFERRMKDVI KQVEAADGKV ILFIDEMHML LGAGRSRKSA NDAANMLKPA
201: LARGRIRCVG ATTFDEYRKY IEKDAALERR FQKVQVEEPS MDTTIEILQA LKKRHERHHG LEIQDAALVA AAQLAGRYIT GRQFPDKAID LIDEACATAS
301: KKMRQINRQK AEVNTKKSSS ANARKEAIIT PDHVAQVVSR WTGIPVTALN QEEKDKLICL ADRLHERVVG QDEAVNLVAD AVLRSRAGLD HPGQPIGSFL
401: FLGSTGVGKT ELAKALAEQL FDSEKMLVRF DMSEYVGSSS VLRLVGAPPS YRGHEDGGQL TEKVRRNPYS VILFDEVEKA DPSVFNIFLQ ILDDGRLTDG
501: RGQTVDFKNT IIIMTSNLGS DYLISKTARK NTTESTRELL MEQVCKHFKP ELLNRLSEIV IFEPLSHDKL KEIMKIQMKS IMARVATKGI SLSVSDAALD
601: TILSESYNPT YGARPIRRWM QKNVMTTLSK MLVKGEASEG STICIEVTDD KKGLKYQVVK KEVSLDQRGL S

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.