Factsheet for TraesCS1A01G304800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G315600.1	Wheat	cytosol	96.91	89.65
HORVU1Hr1G068970.1	Barley	cytosol	91.61	86.27
TraesCS7A01G456700.1	Wheat	mitochondrion	50.07	71.88
TraesCS3A01G090400.1	Wheat	cytosol	54.64	71.62
TraesCS4A01G267200.1	Wheat	cytosol, plastid	68.78	69.6
Os02t0537400-01	Rice	cytosol	44.77	69.41
TraesCS4A01G324200.1	Wheat	cytosol	10.9	68.52
TraesCS3A01G106800.1	Wheat	cytosol	62.74	67.3
TraesCS3A01G124200.1	Wheat	mitochondrion	56.26	66.43
TraesCS4A01G324100.1	Wheat	cytosol	60.82	64.73
TraesCS5A01G062800.1	Wheat	mitochondrion	66.13	64.7
TraesCS7A01G048300.1	Wheat	cytosol	57.14	64.45
TraesCS5A01G046800.1	Wheat	cytosol	45.8	63.47
OQU85081	Sorghum	mitochondrion, plastid	65.68	62.12
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	57.88	61.99
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	56.55	61.74
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	56.26	61.41
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	55.67	60.77
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	53.17	60.37
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	58.32	59.64
TraesCS7A01G048400.1	Wheat	cytosol	56.26	59.41
TraesCS7A01G050700.1	Wheat	extracellular	58.03	59.34
TraesCS4A01G443200.1	Wheat	cytosol	56.11	59.25
TraesCS4A01G443300.1	Wheat	plastid	55.96	59.1
KRH63249	Soybean	mitochondrion	16.49	57.73
OQU81585	Sorghum	cytosol	54.64	57.43
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	48.75	56.01
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	53.02	46.57
TraesCS3A01G274400.1	Wheat	cytosol	54.49	40.53
TraesCS1A01G340100.1	Wheat	nucleus	54.34	40.2
TraesCS6A01G195200.1	Wheat	plastid	44.48	32.97
TraesCS5A01G547300.1	Wheat	golgi, plastid	46.83	32.65
TraesCS5A01G118900.1	Wheat	unclear	43.59	32.17
TraesCS2A01G287300.2	Wheat	plastid	42.12	31.96
TraesCS5A01G321300.1	Wheat	plastid	42.12	30.89
TraesCS6A01G146400.1	Wheat	mitochondrion	44.62	30.58
TraesCS4A01G232900.1	Wheat	cytosol	6.19	30.43
TraesCS2A01G291100.1	Wheat	plastid	42.12	30.23
TraesCS4A01G232800.1	Wheat	plastid	41.53	30.06

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1A01G304800
EnsemblPlants:TraesCS1A01G304800.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:+:497750128..497753226

Molecular Weight (calculated)

73961.5 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.044

Length

679 amino acids

Sequence
(BLAST)

001: MTFSTWLDGV VGGGIVETIT YQVYDRASGT YVTRTFQNPN TLLDDFASVV CTGAAAAACW AAWRYYQRSV SLRKYGRDMT ALAGKADPVI GRDDEIDRVI
101: CILSRRTKNC PALVGAAGVG KTAIAEGLAQ RIAAGTVPAA LAGARVVEVD LGAMVAGTIL RGMFEQRIKN VIKHAEDADG KVILFIDEMH MLLGAGGSLQ
201: DRTTDASNLL KPALAHGCIR CVAATTLDEY NKYIEKDAAL ERRFQKVHVK EPSTQSTIAI LRGLKERYEQ HHCLEIQDAA LVAATTLAAR YITGRQFPDK
301: AIDLIDEACA TAAKKMMQID KQEQQFSIAL TTSAAKEAIV GPDQVAQVVS RWTGIPVTTL NQGEKDKLIN LAARLHERVV GQDEAVNKVA RAVLRSRTGL
401: DQPGQPIGSF LFLGSTGVGK TELAKALAEQ LFDSEKMLVR IDMSEYVGAG SVWRLIGAPP GCYEHQDGGQ LTEKVRRRPY SVILFDEVEK ADPLVLNVFL
501: QLLDDGMLTD GKGRIVDFKN TIIIMTSNVG SEHLMAGMSG ETTMETARSL LMKQVQKHYR PELLNRLSAI VVFEPLSRDK LKEVVTIQMK SVIARVADKG
601: ICLCASDDAL DVILSESYDP MYGARPIRRW VQENVTTMIS EMLVKGEAGS GSTIFVDATV DKKGLKYEVV DPVVGLPSD

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.