Factsheet for TraesCS7A01G048500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G048400.1	Wheat	cytosol	87.07	85.85
TraesCS4A01G443300.1	Wheat	plastid	86.28	85.07
TraesCS4A01G443200.1	Wheat	cytosol	86.28	85.07
HORVU7Hr1G008380.2	Barley	cytosol	35.96	78.08
TraesCS7A01G048300.1	Wheat	cytosol	72.56	76.41
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	76.03	72.59
TraesCS7A01G050700.1	Wheat	extracellular	75.39	71.99
TraesCS5A01G046800.1	Wheat	cytosol	53.63	69.39
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	67.98	69.29
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	67.98	69.29
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	67.67	68.97
TraesCS4A01G437000.1	Wheat	endoplasmic reticulum, mitochondrion	64.35	68.23
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	62.93	67.51
TraesCS7A01G456700.1	Wheat	mitochondrion	47.79	64.06
TraesCS3A01G090400.1	Wheat	cytosol	50.32	61.58
TraesCS3A01G124200.1	Wheat	mitochondrion	55.52	61.22
TraesCS3A01G106800.1	Wheat	cytosol	60.88	60.98
Os02t0537400-01	Rice	cytosol	41.96	60.73
TraesCS4A01G324200.1	Wheat	cytosol	10.25	60.19
TraesCS4A01G267200.1	Wheat	cytosol, plastid	62.62	59.17
TraesCS5A01G062800.1	Wheat	mitochondrion	63.88	58.36
TraesCS4A01G324100.1	Wheat	cytosol	58.52	58.15
TraesCS1A01G304800.1	Wheat	cytosol	61.99	57.88
OQU85081	Sorghum	mitochondrion, plastid	59.94	52.92
OQU81585	Sorghum	cytosol	52.84	51.86
KRH63249	Soybean	mitochondrion	15.46	50.52
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	52.21	42.82
TraesCS3A01G274400.1	Wheat	cytosol	54.89	38.12
TraesCS1A01G340100.1	Wheat	nucleus	53.94	37.25
TraesCS5A01G547300.1	Wheat	golgi, plastid	44.48	28.95
TraesCS6A01G195200.1	Wheat	plastid	41.64	28.82
TraesCS5A01G118900.1	Wheat	unclear	41.64	28.7
TraesCS4A01G232900.1	Wheat	cytosol	6.15	28.26
TraesCS2A01G287300.2	Wheat	plastid	39.75	28.16
TraesCS6A01G146400.1	Wheat	mitochondrion	43.53	27.85
TraesCS4A01G232800.1	Wheat	plastid	41.17	27.83
TraesCS5A01G321300.1	Wheat	plastid	40.22	27.54
TraesCS2A01G291100.1	Wheat	plastid	39.91	26.74

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS7A01G048500	EnsemblPlants:TraesCS7A01G048500.1	TIGR:cd00009	SEG:seg	:	:

Description

No Description!

Coordinates

chr7A:+:22866723..22869105

Molecular Weight (calculated)

69304.7 Da

IEP (calculated)

6.661

GRAVY (calculated)

-0.101

Length

634 amino acids

Sequence
(BLAST)

001: MSSWSCPEGL LFVAASAVAS VAVTWATWAL LEDHHDRLAY NELLGIKPLD ATGSLRTLDA AAADPVIGRD DEIDRVVCIL CRRTKNCAAL VGPAGVGKTA
101: IVEGLAQRIA AGNVPETLVG ARIVEVDMGS MMAGTHWRGM FEQRIKDVIK EAEEAEGKVI LFIDEMHMVV GAGGDKGGPI DAANILKPAL ARGRIRCVGA
201: TTSEEYQKYI QKDAALERRF QKVVVEEPSV HATIAILQGL KHRYQEHHGI KVQDDALVAA AHLAARYITG RKFPDKAIDL MDEACATTKM HADKQTTAEI
301: VVSPGHVARV VSRWTKIPLA TLDQEEKEKL IHLAKKLHER VVGQDEAVNL VAQAVLRSRV GFGQSEQPIS AFLFLGSLGV GKTELAKALA EKIFDSEKAL
401: IRFDMSEYAQ SGSVTRPIGG SRSYEEDGQL TEKVKRCPYS VILFDQVDKA NDSVLKVFLQ LLDDGMLTDG KGQVVDFKNT IIIMTSNLGA EHLTSRMAEK
501: NTIKAERDLL MKQVKKRFKP ELINRLSQVV IFEPLSHGDL REIVKIQMKN VAATAANKGV SVLATDAALD VIWSESHDPV DGARPIRRWV QNHVTTILSD
601: MLVDGEACAG STISIDAADD KRVLTFQVMK KQDD

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.