Factsheet for TraesCS4A01G437000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G050300.1	Wheat	endoplasmic reticulum	94.15	90.51
TraesCS7A01G050400.1	Wheat	endoplasmic reticulum	93.98	90.35
TraesCS4A01G436900.1	Wheat	endoplasmic reticulum	93.81	90.19
TraesCS5D01G254700.2	Wheat	mitochondrion	60.2	84.91
TraesCS5A01G046800.1	Wheat	cytosol	67.56	82.45
TraesCS7A01G048300.1	Wheat	cytosol	65.89	65.45
TraesCS7A01G456700.1	Wheat	mitochondrion	51.34	64.9
TraesCS7A01G048500.1	Wheat	endoplasmic reticulum	68.23	64.35
TraesCS7A01G048400.1	Wheat	cytosol	66.72	62.05
TraesCS4A01G436600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	68.73	61.9
TraesCS7A01G050700.1	Wheat	extracellular	68.39	61.6
TraesCS4A01G443200.1	Wheat	cytosol	65.72	61.12
TraesCS4A01G443300.1	Wheat	plastid	65.55	60.96
TraesCS4A01G324200.1	Wheat	cytosol	10.87	60.19
TraesCS3A01G090400.1	Wheat	cytosol	51.67	59.65
Os02t0537400-01	Rice	cytosol	42.98	58.68
TraesCS7A01G050600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	57.69	58.38
TraesCS3A01G106800.1	Wheat	cytosol	59.36	56.08
TraesCS4A01G324100.1	Wheat	cytosol	58.53	54.86
TraesCS3A01G124200.1	Wheat	mitochondrion	52.68	54.78
TraesCS5A01G062800.1	Wheat	mitochondrion	62.88	54.18
TraesCS4A01G267200.1	Wheat	cytosol, plastid	60.7	54.1
TraesCS1A01G304800.1	Wheat	cytosol	60.37	53.17
KRH63249	Soybean	mitochondrion	16.72	51.55
OQU85081	Sorghum	mitochondrion, plastid	59.03	49.16
OQU81585	Sorghum	cytosol	51.51	47.68
TraesCS4A01G226000.1	Wheat	mitochondrion, plastid	50.33	38.94
TraesCS3A01G274400.1	Wheat	cytosol	53.18	34.83
TraesCS1A01G340100.1	Wheat	nucleus	52.68	34.31
TraesCS4A01G232900.1	Wheat	cytosol	6.69	28.99
TraesCS5A01G547300.1	Wheat	golgi, plastid	45.32	27.82
TraesCS6A01G195200.1	Wheat	plastid	41.64	27.18
TraesCS5A01G321300.1	Wheat	plastid	41.81	27.0
TraesCS5A01G118900.1	Wheat	unclear	41.47	26.96
TraesCS6A01G146400.1	Wheat	mitochondrion	44.15	26.64
TraesCS2A01G287300.2	Wheat	plastid	39.8	26.59
TraesCS4A01G232800.1	Wheat	plastid	41.14	26.23
TraesCS2A01G291100.1	Wheat	plastid	41.14	26.0

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G437000
EnsemblPlants:TraesCS4A01G437000.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:706834705..706838859

Molecular Weight (calculated)

65737.6 Da

IEP (calculated)

7.827

GRAVY (calculated)

-0.089

Length

598 amino acids

Sequence
(BLAST)

001: MEQAMLARVL AVTSVGLSWA VVWSLLSQQH RPFSTPAILR TLDAAAPDPV IGRDDNIDRI ICILCRCTKN CAALVGPAGV GKTAIVEGLA RRIAAGTVPE
101: ALAGARVAEL DAEDSAGKLI LFIDEMHMIV GAGDHRGGTG DAANILKPAL ARGRIRCIGA TTTEEYRKYI QKDAALERRF QRVDVDEPTL QATVVILQGL
201: KQRYQDYHGL IIRDDALVTA AHLAGRYITG RQFPDKAIDL MDEACTSVKL HQPKKVKNKK TSTVNAVEEL TVGPCHIAQV VSRWTKIPIT TLGREEEKFS
301: HLVDRLHERV VGQHEAVNLV AQEVLRSRVS FDQSSQPIGS FLFLGPTGVG KTELAKALAE KLFDNKKTLL RFDMSEFADS GSVARLIGGP RSYEEDGQLT
401: DKVRSQPYSV ILFDEADKAH PSIFKVLIQL LDDGVLIDGK GRSVYFKNTI IIMSSNLGAE NLSAGMAAEN METARDLLME KVEKRFKPEF INKLSETVIF
501: EPLSHDELRE IVKIQMKSVV AMAANKGISL FASDAALDVI WSESHDTVYG ARPIKRWMKK NVTRVLVDMI VSGEACQGST VFIDAADDRK GLKYHVLK

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.