Factsheet for TraesCS7D01G045200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G254700.2	Wheat	mitochondrion	62.36	77.36
TraesCS5A01G046800.1	Wheat	cytosol	65.97	70.82
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	79.66	67.36
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	79.09	66.88
TraesCS7D01G045400.1	Wheat	cytosol	61.03	65.11
TraesCS7D01G042800.1	Wheat	plastid	67.87	55.52
TraesCS7D01G042900.1	Wheat	cytosol	67.49	55.21
TraesCS7D01G445500.1	Wheat	cytosol	37.26	54.6
TraesCS7D01G046200.1	Wheat	cytosol	53.42	53.83
TraesCS3D01G090400.1	Wheat	mitochondrion	57.6	51.01
TraesCS7D01G445400.1	Wheat	cytosol	54.37	50.35
KRH63249	Soybean	mitochondrion	18.25	49.48
TraesCS2D01G136900.1	Wheat	cytosol	48.48	48.85
TraesCS5D01G429500.1	Wheat	cytosol	61.41	48.28
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	61.03	48.13
TraesCS4D01G046000.1	Wheat	cytosol	60.65	48.11
TraesCS4D01G047000.1	Wheat	cytosol	60.27	47.53
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	61.22	46.8
TraesCS5D01G429600.1	Wheat	mitochondrion	61.03	46.66
TraesCS5D01G074000.1	Wheat	mitochondrion	61.22	46.46
OQU85081	Sorghum	mitochondrion, plastid	60.65	44.43
Os02t0537400-01	Rice	cytosol	35.93	43.15
OQU81585	Sorghum	cytosol	49.81	40.56
TraesCS3D01G273600.1	Wheat	cytosol	53.42	30.78
TraesCS1D01G342100.1	Wheat	golgi	53.61	30.72
TraesCS3D01G449000.1	Wheat	cytosol	14.64	27.7
TraesCS2D01G285800.1	Wheat	plastid	44.3	25.41
TraesCS6D01G183600.2	Wheat	cytosol, plastid	44.11	25.33
TraesCS5D01G118700.1	Wheat	plastid	44.3	25.33
TraesCS6D01G135600.1	Wheat	golgi	46.58	24.72
TraesCS5D01G328100.1	Wheat	plastid	42.97	24.3
TraesCS4D01G081100.1	Wheat	plastid	42.97	24.04
TraesCS2D01G289100.1	Wheat	plastid	42.59	23.68

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF07724	PRINTS:PR00300	ScanProsite:PS00870	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100
SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS7D01G045200	EnsemblPlants:TraesCS7D01G045200.1	TIGR:cd00009	SEG:seg

Description

No Description!

Coordinates

chr7D:+:22861250..22863111

Molecular Weight (calculated)

57399.3 Da

IEP (calculated)

6.436

GRAVY (calculated)

-0.107

Length

526 amino acids

Sequence
(BLAST)

001: MIRVLSVTAV GLACTALRLY EEELKSLFTS RPAFLKTLDP AGADPVIGRD DEIDRVICIL CGRTKNCAAL VGAAGVGKTA IVEGLAQRIA AGAVPDALVG
101: ARIAELDVGA MVAGTQWRGM FEQRLKDAIN QAEGADGKLI LFIDEMHMIV GAGDRDGPGD AANILKPALA RGRIRCIGAT TSEEYRRYIQ KDAALERRFQ
201: KVDVEEPSVQ ATVAILQGLK QWYQDHHGLT IRDDALAAAA QLAARYITGR QFPDKAIDLM DEACTTVKLH KPKEVQNKET NTRNAPEEIT VAPCHIAQVV
301: SRWTKIPITT LGREEEKLSH LADRLHERVV GQHEAVNLVA QEVLRSGVGF DQSGQPIGSF LFLGPAGVGK TELAKALAEK LFDNEKALVR FDMSEYADSG
401: SVSRLFGGPR RFSFYEEDGQ LTEKVRSQPY SVVLFDEADK SHPSIFKVLI QLLDDGMLVD GKGRNVNFKN TIIIMSSTLG AENLSARMAG ENIETARDLL
501: MKQVCVSQTV PCKVPVRTLL IDKFTC

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.