Factsheet for TraesCS7D01G045400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	83.37	66.08
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	82.96	65.76
TraesCS7D01G046200.1	Wheat	cytosol	67.34	63.6
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	65.11	61.03
TraesCS5D01G254700.2	Wheat	mitochondrion	48.48	56.37
TraesCS2D01G136900.1	Wheat	cytosol	59.03	55.75
Os02t0537400-01	Rice	cytosol	48.48	54.57
TraesCS3D01G090400.1	Wheat	mitochondrion	61.26	50.84
TraesCS7D01G042800.1	Wheat	plastid	66.13	50.7
TraesCS7D01G042900.1	Wheat	cytosol	65.11	49.92
TraesCS3D01G449000.1	Wheat	cytosol	27.38	48.56
TraesCS7D01G445400.1	Wheat	cytosol	55.58	48.24
TraesCS5D01G429500.1	Wheat	cytosol	63.29	46.64
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	62.88	46.48
TraesCS4D01G046000.1	Wheat	cytosol	62.07	46.15
TraesCS4D01G047000.1	Wheat	cytosol	62.07	45.88
KRH63249	Soybean	mitochondrion	18.05	45.88
TraesCS5D01G074000.1	Wheat	mitochondrion	64.1	45.6
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	62.47	44.77
TraesCS5D01G429600.1	Wheat	mitochondrion	61.66	44.19
OQU85081	Sorghum	mitochondrion, plastid	59.03	40.53
OQU81585	Sorghum	cytosol	52.33	39.94
TraesCS7D01G445500.1	Wheat	cytosol	25.56	35.1
TraesCS3D01G273600.1	Wheat	cytosol	54.16	29.24
TraesCS1D01G342100.1	Wheat	golgi	53.14	28.54
TraesCS2D01G285800.1	Wheat	plastid	40.37	21.7
TraesCS6D01G135600.1	Wheat	golgi	43.41	21.59
TraesCS6D01G183600.2	Wheat	cytosol, plastid	39.96	21.51
TraesCS5D01G118700.1	Wheat	plastid	39.96	21.41
TraesCS5D01G328100.1	Wheat	plastid	39.76	21.08
TraesCS4D01G081100.1	Wheat	plastid	39.76	20.85
TraesCS2D01G289100.1	Wheat	plastid	39.76	20.72

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	PANTHER:PTHR11638
PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS7D01G045400	EnsemblPlants:TraesCS7D01G045400.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:22904676..22920345

Molecular Weight (calculated)

54957.8 Da

IEP (calculated)

9.670

GRAVY (calculated)

-0.226

Length

493 amino acids

Sequence
(BLAST)

001: MFEQRLKNAI KQAEDAAGKM ILFIDQMHMI VGAGDEGRTV DAANILKPAL ARGRIRCIGA TTSKEYRRYI ERDAALERWF QRVDVDEPSV QATVAILQGL
101: KKRYQDHHGL IIQDDALVAA AQLAGRYIKG RQFPDKAIDL MDEACTVVKL HKPKKVKNKK TSTINAVEEK TVGPCHIAQV VGRWTKIPIT ALGREEKFSH
201: LVDRSHERVI GQYEAVNLVA QEVLRSKVGF DESGKPIGAF LFLGPIGVGK TELAKALAEK LFDNEKTLVR FDMSEYADSG SVSRLVGGPG RYGQLIEKVR
301: SQPYSVVLLD EVDKAHPSIF KVLIQLLNDG TLIDGKGRNI YFKDTIIVMS SSLRAENLSA GTARENIATA RDLLMKQVEK RLKPDFINKL SEIVIFEPLS
401: HDEPREIVKI QMKSVVAMAA KKGISLFATD AALDIIWSES HDTVYGARPI KRWVKKNVTR VLMDMLVNRE ACQGSTISID AADDKKGLKY DVY

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.