Factsheet for TraesCS5D01G074000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

endoplasmic reticulum 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G062800.1	Wheat	mitochondrion	93.22	93.08
TraesCS5B01G070000.1	Wheat	mitochondrion	61.9	90.51
TraesCS3D01G090400.1	Wheat	mitochondrion	60.32	70.37
TraesCS7D01G445400.1	Wheat	cytosol	56.42	68.84
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	66.23	68.82
Os02t0537400-01	Rice	cytosol	43.43	68.72
TraesCS5D01G429500.1	Wheat	cytosol	66.23	68.61
TraesCS2D01G136900.1	Wheat	cytosol	51.37	68.2
TraesCS4D01G047000.1	Wheat	cytosol	65.51	68.07
TraesCS4D01G046000.1	Wheat	cytosol	64.65	67.57
TraesCS5D01G429600.1	Wheat	mitochondrion	65.66	66.13
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	65.51	65.99
TraesCS7D01G045400.1	Wheat	cytosol	45.6	64.1
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	57.29	63.83
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	57.29	63.83
TraesCS7D01G445500.1	Wheat	cytosol	32.9	63.51
TraesCS7D01G046200.1	Wheat	cytosol	46.75	62.07
TraesCS7D01G042900.1	Wheat	cytosol	57.43	61.9
TraesCS3D01G449000.1	Wheat	cytosol	24.82	61.87
TraesCS7D01G042800.1	Wheat	plastid	57.29	61.74
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	46.46	61.22
TraesCS5D01G254700.2	Wheat	mitochondrion	36.8	60.14
OQU85081	Sorghum	mitochondrion, plastid	60.75	58.64
OQU81585	Sorghum	cytosol	53.68	57.59
KRH63249	Soybean	mitochondrion	16.02	57.22
TraesCS3D01G273600.1	Wheat	cytosol	52.24	39.65
TraesCS1D01G342100.1	Wheat	golgi	51.66	39.0
TraesCS5D01G118700.1	Wheat	plastid	42.57	32.07
TraesCS6D01G183600.2	Wheat	cytosol, plastid	41.85	31.66
TraesCS2D01G285800.1	Wheat	plastid	41.85	31.62
TraesCS6D01G135600.1	Wheat	golgi	43.58	30.47
TraesCS4D01G081100.1	Wheat	plastid	40.4	29.79
TraesCS5D01G328100.1	Wheat	plastid	39.83	29.68
TraesCS2D01G289100.1	Wheat	plastid	39.97	29.28

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5D01G074000
EnsemblPlants:TraesCS5D01G074000.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:-:72909509..72912975

Molecular Weight (calculated)

75665.7 Da

IEP (calculated)

7.908

GRAVY (calculated)

-0.139

Length

693 amino acids

Sequence
(BLAST)

001: MGGSKLGVEA SRHLTRVWRE IEPVLWLGAT AGLCWAAWRY YRYRACLCSF GRKMGGSSEG EGDPVIGRDK EIDRVICILC RRSKNCAALV GEAGVGKTAI
101: IEGLAQRIAS GKVPANLAGA RVVEVDLGAM LAGTSLRGMF EERIKDVIKS AEAGDGKVIL FIDEMHMLLG AGDVVGGTDA ANLLKPALAR GRIRCVGATT
201: LKEYHRYIQT DAALERRFQK VHVKEPSVQA TVTILQGLKQ RYQDHHVLEI QDAALVAAAE LAGRYITDRQ FPDKAIDLID EACATTRMLV DSESEATGTR
301: TQSYNKKEVT AQSRSIKAVK KGIVGPSQVA QVVSLWTGIP VAAIDQGEKE KLLHLAEKLH ERVVGQDEAV NLVAQTVLRS RVGLDQPGQP IGSFLFLGST
401: GVGKTELAKA LAEQLFDNEN MLVRFDMSEY GTKGSVLRLI GAPPSYFGYD DGGQLTEKVK SHPYSVILFD EVEKAHREVY NVFLQLLDDG LLTDGKGRTV
501: DFKNTIIIMT SNLGSKHLAA GMVGKNTMQE THKLVMKEVW KRFKPELLNR LSEIVIFEPL SHDKLKEIVK IQMKNAVARV AKKGISLHAS DAALDVILSE
601: SYEPMYGARP IRRWIQKNVM NTICEMLVKG EAGEGSTISI DATDHNKGLK YEVVKKAADP SGTILVPAPE PLACPDEESD DSVMVTSLTK CLG

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.