Factsheet for TraesCS5D01G328100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G081860.1	Barley	cytosol	81.18	98.82
TraesCS5B01G321800.1	Wheat	plastid	97.53	97.84
TraesCS5A01G321300.1	Wheat	plastid	96.77	97.19
Os02t0526400-01	Rice	cytosol, plasma membrane	75.91	85.89
Zm00001d016664_P001	Maize	plastid	83.44	81.94
EES05165	Sorghum	plastid	83.33	80.98
TraesCS2D01G289100.1	Wheat	plastid	75.59	74.31
GSMUA_Achr6P23780_001	Banana	cytosol	61.94	68.17
CDY38846	Canola	plastid	60.0	59.94
Bra029193.1-P	Field mustard	plastid	60.22	59.38
AT5G51070.1	Thale cress	plastid	60.22	59.26
CDX71686	Canola	plastid	59.35	59.23
CDY32646	Canola	plastid	59.35	59.1
VIT_19s0014g00020.t01	Wine grape	plastid	60.11	59.09
KRH63903	Soybean	plastid	58.17	57.19
Solyc03g117950.2.1	Tomato	nucleus	59.03	56.95
PGSC0003DMT400036893	Potato	plastid	58.92	56.79
KRH54048	Soybean	plastid	57.74	56.53
GSMUA_Achr10P...	Banana	plastid	59.89	56.21
TraesCS2D01G285800.1	Wheat	plastid	43.55	44.17
TraesCS5D01G118700.1	Wheat	plastid	43.66	44.13
TraesCS6D01G183600.2	Wheat	cytosol, plastid	43.33	44.0
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	24.3	42.97
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	27.96	41.8
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	27.96	41.8
TraesCS4D01G046000.1	Wheat	cytosol	29.78	41.78
TraesCS2D01G136900.1	Wheat	cytosol	23.44	41.76
TraesCS5D01G254700.2	Wheat	mitochondrion	19.03	41.75
TraesCS3D01G090400.1	Wheat	mitochondrion	26.56	41.58
TraesCS4D01G081100.1	Wheat	plastid	41.83	41.38
TraesCS7D01G445400.1	Wheat	cytosol	25.16	41.2
TraesCS4D01G047000.1	Wheat	cytosol	29.35	40.93
TraesCS5D01G074000.1	Wheat	mitochondrion	29.68	39.83
TraesCS5D01G429500.1	Wheat	cytosol	28.6	39.76
TraesCS7D01G045400.1	Wheat	cytosol	21.08	39.76
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	28.39	39.58
TraesCS7D01G445500.1	Wheat	cytosol	15.16	39.28
TraesCS7D01G042900.1	Wheat	cytosol	27.1	39.19
TraesCS7D01G042800.1	Wheat	plastid	26.99	39.04
TraesCS7D01G046200.1	Wheat	cytosol	21.51	38.31
TraesCS5D01G429600.1	Wheat	mitochondrion	27.85	37.65
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	27.85	37.65
TraesCS1D01G342100.1	Wheat	golgi	35.7	36.17
TraesCS3D01G273600.1	Wheat	cytosol	35.05	35.71
TraesCS6D01G135600.1	Wheat	golgi	37.74	35.42
TraesCS3D01G449000.1	Wheat	cytosol	10.22	34.17

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:19.4.2.9.5	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2	InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152
GO:GO:0019538	InterPro:IPR036628	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02861	PFAM:PF07724
PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871	PANTHER:PTHR43572	PANTHER:PTHR43572:SF17
SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	SUPFAM:SSF81923	EnsemblPlantsGene:TraesCS5D01G328100	EnsemblPlants:TraesCS5D01G328100.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:420711305..420715875

Molecular Weight (calculated)

100867.0 Da

IEP (calculated)

7.007

GRAVY (calculated)

-0.192

Length

930 amino acids

Sequence
(BLAST)

001: MEVCCCSTSS SLLAGGRFAA PAPAAAYARH RGAAAGGGIR RAAVLALARP PRPATASRPA RRGVTRAVFE RFTERAVKAV VHSQKEARGL GEGAVAPRHL
101: LLGLVAEDRS AGGFLSSGIT VERAREECRG LIGAAAAQKA GGLDTDVPFD GGCRRVFEVA VELSRNMGCS FISPEHLAIA LFTLDDPTTN NLLRSLGADP
201: SQLASVAVTR LHEELAKDGR DLAGASSLKV PEKAPAGAGA GRSAFSKSLS KKKDKGALDQ FCLDLTTQAS GGFIDPIIGR EEEIERVVQI ICRRTKNNPI
301: LLGEAGVGKT AIAEGLALRI ANGDVPIFLV AKRIMSLDIG LLIAGAKERG ELESRITSLI REVREAGDVI LFIDEVHNLV GSGTAGKGKG AGLDISNLLK
401: PPLARGELQC IAATTLDEHR MHFEKDKALN RRFQPVFVDE PSQEDAVKIL LGLRENYETY HKCKFTLEAI NAAVYLSARY IPDRQLPDKA IDLIDEAGSR
501: ARIESYQKKK EGQSSVLLKE PDEYWQEIKA VQAMHEVVLS NKMKYSPNEN KQQNASVNTE GPHQDKAEST IEEPIVVGTE EIARVASLWS GIPVQQLTAD
601: DKKILVGLDD ELRKRVIGQD DAVAAISRAV KRSRVGLSDP DRPIATMLFC GPTGVGKTEL TKALAASYFG SESAMLRLDM SEYMERHTVS KLIGSPPGYI
701: GYGETGTLTE AVRRKPFTVV LLDEIEKAHP DIFNILLQIF EDGHLADSQG RRVSFKNTLI VMTSNVGSTS ISNGRRSMGF STDDTESSRY VAVKSLVMEE
801: LKGFFRPELL NRIDETVVFR PLEQTQMLAI LDILLEELKG KLLAVGIGLE VSDAMKELIC REGYDKNYGA RPLRRAITQL MEDVISEAIL FGEYKPGDTI
901: LVDTDSKGKP CLSRLNQPPT VQVSDSTRTF

Best Arabidopsis Sequence Match ( AT5G51070.1 )
(BLAST)

001: MEVLSTSSPL TLHSHRLLSA SSSSSHVTSI AASSLSSFAS SYLGISLSNR TIHRFSTTPT NLRRFPQRKR KKFTPISAVF ERFTERAIRA IIFSQKEAKS
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA

Arabidopsis Description

CLPDChaperone protein ClpD, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42762]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.