Factsheet for TraesCS7D01G046200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G045400.1	Wheat	cytosol	63.6	67.34
Os02t0537400-01	Rice	cytosol	48.28	57.53
TraesCS2D01G136900.1	Wheat	cytosol	57.47	57.47
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	66.86	56.11
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	66.48	55.79
TraesCS3D01G090400.1	Wheat	mitochondrion	62.26	54.71
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	53.83	53.42
TraesCS7D01G042800.1	Wheat	plastid	64.94	52.72
TraesCS7D01G042900.1	Wheat	cytosol	64.56	52.41
TraesCS7D01G445400.1	Wheat	cytosol	55.75	51.23
TraesCS5D01G254700.2	Wheat	mitochondrion	39.66	48.82
TraesCS4D01G046000.1	Wheat	cytosol	61.49	48.42
TraesCS5D01G429500.1	Wheat	cytosol	61.49	47.98
TraesCS4D01G047000.1	Wheat	cytosol	60.73	47.53
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	60.54	47.38
KRH63249	Soybean	mitochondrion	17.43	46.91
TraesCS3D01G449000.1	Wheat	cytosol	24.9	46.76
TraesCS5D01G074000.1	Wheat	mitochondrion	62.07	46.75
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	61.3	46.51
TraesCS5D01G429600.1	Wheat	mitochondrion	61.11	46.37
OQU81585	Sorghum	cytosol	52.87	42.72
OQU85081	Sorghum	mitochondrion, plastid	57.66	41.92
TraesCS7D01G445500.1	Wheat	cytosol	25.48	37.05
TraesCS3D01G273600.1	Wheat	cytosol	52.87	30.23
TraesCS1D01G342100.1	Wheat	golgi	52.11	29.63
TraesCS6D01G183600.2	Wheat	cytosol, plastid	39.66	22.6
TraesCS5D01G118700.1	Wheat	plastid	39.66	22.5
TraesCS2D01G285800.1	Wheat	plastid	39.46	22.46
TraesCS6D01G135600.1	Wheat	golgi	41.57	21.9
TraesCS2D01G289100.1	Wheat	plastid	39.46	21.78
TraesCS5D01G328100.1	Wheat	plastid	38.31	21.51
TraesCS4D01G081100.1	Wheat	plastid	38.51	21.38

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_AAA_core	InterPro:ClpA/B	InterPro:ClpA/B_CS1
InterPro:Clp_ATPase_C	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS7D01G046200	EnsemblPlants:TraesCS7D01G046200.1
TIGR:cd00009	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:23523645..23525666

Molecular Weight (calculated)

58195.1 Da

IEP (calculated)

7.906

GRAVY (calculated)

-0.160

Length

522 amino acids

Sequence
(BLAST)

001: MIAGTSLRGQ FEQRLKEAIK QAEDESSKLI LFIDEMHMLI GAGDGSGTAD AANILKPALA RGRLRCVGAT TSQEYYKYIE QDAALERRFQ KVEVGEPSMQ
101: TTVAILQGLK HKYQEHHGLK IDDEALVAAV ELAARYITGR KFPDKAIDLM DEACTTVKLR ASKQRETNAP GEVLVGQGHV TEVIPNHMSY IVSRWTGIPI
201: TTLDQEEEKL THLIDRLHER VVGQNETVSL VAQAVLRSRV GIDKSGQPIC SFLFLGSIGV GKTELAKALA EKLFNNEKML VCFDMSEYAE SGSLLRLIGG
301: PRRFDLYTCL IRRRPYSVIL FNEMDKANPS ILKLFVQLLN DGMLVDGKGR DVDFKNTIII MSSNLGSEHL SAEVGGENTM ESARDFLMKQ VEKRFKPDLM
401: NRLSEIVIFE PLSHHELREI LKIQMKSIVA MMAKKRISLS VADAALEVIL SESHDKVNGA RPIKMWVRKH VATILSNMLV NGEACKGSTI SIDASDDKRG
501: LKYRVLKKQE MADPLGLLQV ML

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.