Factsheet for TraesCS2D01G136900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G158300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	97.32	73.62
Os02t0537400-01	Rice	cytosol	54.02	64.38
TraesCS3D01G090400.1	Wheat	mitochondrion	70.11	61.62
TraesCS3D01G449000.1	Wheat	cytosol	31.61	59.35
TraesCS7D01G045400.1	Wheat	cytosol	55.75	59.03
KRH63249	Soybean	mitochondrion	21.84	58.76
TraesCS7D01G046200.1	Wheat	cytosol	57.47	57.47
TraesCS7D01G445400.1	Wheat	cytosol	61.88	56.87
TraesCS4D01G046000.1	Wheat	cytosol	71.26	56.11
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	69.73	54.57
TraesCS4D01G047000.1	Wheat	cytosol	69.73	54.57
TraesCS5D01G429500.1	Wheat	cytosol	69.54	54.26
TraesCS5D01G429600.1	Wheat	mitochondrion	69.73	52.91
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	69.35	52.62
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	61.3	51.45
TraesCS5D01G074000.1	Wheat	mitochondrion	68.2	51.37
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	61.11	51.29
TraesCS7D01G042800.1	Wheat	plastid	59.77	48.52
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	48.85	48.48
TraesCS7D01G042900.1	Wheat	cytosol	59.39	48.21
OQU85081	Sorghum	mitochondrion, plastid	65.71	47.77
OQU81585	Sorghum	cytosol	57.47	46.44
TraesCS5D01G254700.2	Wheat	mitochondrion	36.21	44.58
TraesCS7D01G445500.1	Wheat	cytosol	28.74	41.78
TraesCS3D01G273600.1	Wheat	cytosol	56.13	32.09
TraesCS1D01G342100.1	Wheat	golgi	55.75	31.7
TraesCS6D01G183600.2	Wheat	cytosol, plastid	46.17	26.31
TraesCS2D01G285800.1	Wheat	plastid	46.17	26.28
TraesCS5D01G118700.1	Wheat	plastid	46.17	26.2
TraesCS6D01G135600.1	Wheat	golgi	46.74	24.62
TraesCS4D01G081100.1	Wheat	plastid	44.06	24.47
TraesCS5D01G328100.1	Wheat	plastid	41.76	23.44
TraesCS2D01G289100.1	Wheat	plastid	41.38	22.83

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B
InterPro:Clp_ATPase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	SMART:SM00382
SMART:SM01086	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS2D01G136900	EnsemblPlants:TraesCS2D01G136900.1	TIGR:cd00009	SEG:seg

Description

No Description!

Coordinates

chr2D:+:80655240..80659284

Molecular Weight (calculated)

58189.5 Da

IEP (calculated)

8.754

GRAVY (calculated)

-0.207

Length

522 amino acids

Sequence
(BLAST)

001: MVAGTQYRGM FEERMKNVIK RAEASNGKII LFVDEMHMLY SAGSSRTNCT SASNMFKPAL ARGRIRCVGA TTFDEYRQYV EKDPALERRF QKVHVGEPSI
101: EATIAILRGL KQRFQDHHGL EIQDAALVAA AHLGARYITG RQFPDKAIDL IDEACTFIAR KMKQIDNTTP SSLNDANRVK KAIVDPNDVA QVVSRWTGIP
201: VATLCEEEKD KLIHIRDRER VIGQDEAVNL VAQAVLRSRA GLDQPSQPTG SFLFLGLSGV GKTELAKALA KQLFDSEKML VRVDMSEYAT VGSVTRLIGA
301: PPSYIGYEDS GQLTEKVRKH PYSLILFDEV EKAHPSVFNI FLQILDDGML TDGKGRTVDF KNTIIIMTSN LGSEYLTTKM TGEKPLEVAR NLVTEKVQKF
401: FKPELLNRIS EIVIFESLSY EQMKEVAKIQ IKNVVARVAN KGISLSTTNA LLDVIMSESH NPMYGARPIR RWVERNVITM LSEMLVKGEA GEGSAIFINA
501: TDDKKGLKYE VVKMPVLDFS SA

Best Arabidopsis Sequence Match ( AT3G48870.1 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.