Factsheet for TraesCS7D01G445500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G105430.1	Barley	cytosol	93.59	59.89
HORVU7Hr1G105530.1	Barley	cytosol	93.59	51.14
TraesCS5D01G254700.2	Wheat	mitochondrion	53.48	45.28
TraesCS7D01G445400.1	Wheat	cytosol	62.95	39.79
TraesCS7D01G045200.1	Wheat	extracellular, mitochondrion	54.6	37.26
TraesCS5D01G429500.1	Wheat	cytosol	69.36	37.22
TraesCS5D01G429400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	69.08	37.18
TraesCS4D01G046000.1	Wheat	cytosol	66.85	36.2
TraesCS3D01G090400.1	Wheat	mitochondrion	59.89	36.2
TraesCS4D01G047000.1	Wheat	cytosol	66.85	35.98
TraesCS5D01G429700.1	Wheat	endoplasmic reticulum, mitochondrion, plastid	67.41	35.17
TraesCS5D01G429600.1	Wheat	mitochondrion	66.85	34.88
TraesCS5D01G074000.1	Wheat	mitochondrion	63.51	32.9
TraesCS7D01G045700.1	Wheat	endoplasmic reticulum	54.32	31.35
TraesCS7D01G045500.1	Wheat	endoplasmic reticulum	54.04	31.19
TraesCS7D01G042900.1	Wheat	cytosol	55.15	30.79
TraesCS7D01G042800.1	Wheat	plastid	53.76	30.02
OQU85081	Sorghum	mitochondrion, plastid	59.89	29.94
TraesCS2D01G136900.1	Wheat	cytosol	41.78	28.74
TraesCS7D01G045400.1	Wheat	cytosol	35.1	25.56
TraesCS7D01G046200.1	Wheat	cytosol	37.05	25.48
OQU81585	Sorghum	cytosol	44.57	24.77
TraesCS3D01G273600.1	Wheat	cytosol	48.47	19.06
TraesCS1D01G342100.1	Wheat	golgi	48.19	18.85
TraesCS6D01G183600.2	Wheat	cytosol, plastid	44.29	17.36
TraesCS2D01G285800.1	Wheat	plastid	44.01	17.23
TraesCS5D01G118700.1	Wheat	plastid	44.01	17.17
TraesCS6D01G135600.1	Wheat	golgi	46.52	16.85
Os02t0537400-01	Rice	cytosol	20.33	16.67
TraesCS4D01G081100.1	Wheat	plastid	42.9	16.38
TraesCS5D01G328100.1	Wheat	plastid	39.28	15.16
TraesCS2D01G289100.1	Wheat	plastid	39.0	14.8
TraesCS3D01G449000.1	Wheat	cytosol	0.0	0.0
KRH63249	Soybean	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7D01G445500.1	EnsemblPlantsGene:TraesCS7D01G445500	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:ClpA/B_CS1	InterPro:P-loop_NTPase
PANTHER:PTHR11638	PANTHER:PTHR11638:SF100	PFAM:PF00004	ScanProsite:PS00870	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7D:+:566319814..566322651

Molecular Weight (calculated)

38794.8 Da

IEP (calculated)

8.147

GRAVY (calculated)

-0.109

Length

359 amino acids

Sequence
(BLAST)

001: MASDGETPTG AVLDRFLSHA SRLYGSVESV LCAGAAIGLC WAAWRYYERT VCLRSYGRDM TAGSKQAVSP VVGRDSEIDR VISILCRKTK NCAALVGAAG
101: VGKTAIAEGL AQRIAAGKVP AALAGARVVD VDLGAMVAGT MFRGMFEERL KGVIKKAEDS GGKIVLFIDE MHTLLGAGAV RGGCQDAANM LKPALARGRI
201: RCVGATTFDD YRKYIEKDAA LERRFQKVHV EEPSAQATIA MLRALKQEYE QHHGLEIQDA TLVAAVQLAD RYITGRQFPD KAIDLIDEAC ATETKTMMRV
301: GDQKENNTVQ SSSKNAVKEA IVCPNHVAQV VSQWTGIPVT ALDQEEKDRL IHLASRLRE

Best Arabidopsis Sequence Match ( AT1G74310.1 )
(BLAST)

001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D

Arabidopsis Description

CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.