Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G064000.1 | Wheat | plastid | 94.56 | 94.56 |
| TraesCSU01G211500.1 | Wheat | cytosol | 94.56 | 94.56 |
| TraesCS7D01G042900.1 | Wheat | cytosol | 94.4 | 94.4 |
| TraesCS4A01G443200.1 | Wheat | cytosol | 94.25 | 94.25 |
| TraesCS4A01G443300.1 | Wheat | plastid | 94.09 | 94.09 |
| HORVU7Hr1G008380.2 | Barley | cytosol | 35.15 | 77.4 |
| TraesCS7D01G045200.1 | Wheat | extracellular, mitochondrion | 55.52 | 67.87 |
| TraesCS7D01G045500.1 | Wheat | endoplasmic reticulum | 65.16 | 67.36 |
| TraesCS7D01G045700.1 | Wheat | endoplasmic reticulum | 65.16 | 67.36 |
| TraesCS7D01G045400.1 | Wheat | cytosol | 50.7 | 66.13 |
| TraesCS5D01G254700.2 | Wheat | mitochondrion | 43.39 | 65.8 |
| TraesCS7D01G046200.1 | Wheat | cytosol | 52.72 | 64.94 |
| TraesCS3D01G090400.1 | Wheat | mitochondrion | 57.08 | 61.78 |
| TraesCS2D01G136900.1 | Wheat | cytosol | 48.52 | 59.77 |
| TraesCS7D01G445400.1 | Wheat | cytosol | 52.57 | 59.51 |
| Os02t0537400-01 | Rice | cytosol | 40.12 | 58.9 |
| TraesCS4D01G046000.1 | Wheat | cytosol | 60.34 | 58.52 |
| TraesCS4D01G047000.1 | Wheat | cytosol | 60.34 | 58.17 |
| TraesCS5D01G074000.1 | Wheat | mitochondrion | 61.74 | 57.29 |
| TraesCS5D01G429500.1 | Wheat | cytosol | 59.1 | 56.8 |
| TraesCS5D01G429400.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 58.79 | 56.67 |
| TraesCS5D01G429700.1 | Wheat | endoplasmic reticulum, mitochondrion, plastid | 59.25 | 55.38 |
| TraesCS5D01G429600.1 | Wheat | mitochondrion | 58.79 | 54.94 |
| TraesCS7D01G445500.1 | Wheat | cytosol | 30.02 | 53.76 |
| OQU85081 | Sorghum | mitochondrion, plastid | 58.16 | 52.09 |
| TraesCS3D01G449000.1 | Wheat | cytosol | 21.31 | 49.28 |
| OQU81585 | Sorghum | cytosol | 49.3 | 49.07 |
| KRH63249 | Soybean | mitochondrion | 14.77 | 48.97 |
| TraesCS3D01G273600.1 | Wheat | cytosol | 52.26 | 36.8 |
| TraesCS1D01G342100.1 | Wheat | golgi | 51.63 | 36.17 |
| TraesCS6D01G183600.2 | Wheat | cytosol, plastid | 41.21 | 28.93 |
| TraesCS2D01G285800.1 | Wheat | plastid | 41.21 | 28.9 |
| TraesCS5D01G118700.1 | Wheat | plastid | 41.21 | 28.8 |
| TraesCS6D01G135600.1 | Wheat | golgi | 43.55 | 28.25 |
| TraesCS4D01G081100.1 | Wheat | plastid | 39.81 | 27.23 |
| TraesCS5D01G328100.1 | Wheat | plastid | 39.04 | 26.99 |
| TraesCS2D01G289100.1 | Wheat | plastid | 39.04 | 26.53 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:ClpA/B |
| InterPro:ClpA/B_CS1 | InterPro:Clp_ATPase_C | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 |
| ScanProsite:PS00870 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS7D01G042800 | EnsemblPlants:TraesCS7D01G042800.1 | TIGR:cd00009 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7D:-:21937426..21939844
Molecular Weight (calculated)
70410.9 Da
IEP (calculated)
6.622
GRAVY (calculated)
-0.120
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWSSPESML FVGASAVASA ALAWATWTLL DEFKYDKRTS DTNYNELLGV KPLDATGSLR TLDAATTDPV IGRDDEIDRL VCILCRRTKN CAALVGAAGV
101: GKTAIVEGLA QRIAAGNVPD TLVGTHIVEV DMGAMMAGTH WRGMFEQRIK DAIKEAEEAE GKIILFIDEM HMVVGAGGDK GGPIDAANIL KPALARGRIR
201: CVGATTSEEY KKYVQTDAAL ERRFQKVVVE EPTVHATIAI LQGLKHRYQE HHGLKIQDDA IVAAAHLAAR YITGRKFPDK AVDLMDEACA TRKMHADKQM
301: TVEIVVSPGD VARVVSRWTK IPLATLDQEE NDKLNHLAKK LHERVIGQDE AVNLVAQAVL RSRVGFGQIG QPISAFLFLG PIGVGKTELA KALAEKIFDN
401: EKALIRFDMS EYADSGSVSR LTGGSRSYEE YGQLTEKVKR LPYSVILFDQ VDKANASVFK VFHQLLDDAM LTDGKGQVVD FKNTIVIMTS NIGAEHLPSR
501: IMGENTIKSE RDLLLNQVKK RFKPELINRL SKVVIFEPLS HDELRKIVKI QMNNVIATVA NKGVSVLATD AALDVILSES HDPVDGARPI RRWVQNHVTT
601: ILSDMLVDGE ACAGSTISID AAADDKRGLT FQVLKKQQEL ADQ
101: GKTAIVEGLA QRIAAGNVPD TLVGTHIVEV DMGAMMAGTH WRGMFEQRIK DAIKEAEEAE GKIILFIDEM HMVVGAGGDK GGPIDAANIL KPALARGRIR
201: CVGATTSEEY KKYVQTDAAL ERRFQKVVVE EPTVHATIAI LQGLKHRYQE HHGLKIQDDA IVAAAHLAAR YITGRKFPDK AVDLMDEACA TRKMHADKQM
301: TVEIVVSPGD VARVVSRWTK IPLATLDQEE NDKLNHLAKK LHERVIGQDE AVNLVAQAVL RSRVGFGQIG QPISAFLFLG PIGVGKTELA KALAEKIFDN
401: EKALIRFDMS EYADSGSVSR LTGGSRSYEE YGQLTEKVKR LPYSVILFDQ VDKANASVFK VFHQLLDDAM LTDGKGQVVD FKNTIVIMTS NIGAEHLPSR
501: IMGENTIKSE RDLLLNQVKK RFKPELINRL SKVVIFEPLS HDELRKIVKI QMNNVIATVA NKGVSVLATD AALDVILSES HDPVDGARPI RRWVQNHVTT
601: ILSDMLVDGE ACAGSTISID AAADDKRGLT FQVLKKQQEL ADQ
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.